3fca: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3fca.png|left|200px]]


<!--
==Genetic Incorporation of a Metal-ion Chelating Amino Acid into proteins as biophysical probe==
The line below this paragraph, containing "STRUCTURE_3fca", creates the "Structure Box" on the page.
<StructureSection load='3fca' size='340' side='right'caption='[[3fca]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3fca]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FCA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FCA FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.149&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HQA:3-(8-HYDROXYQUINOLIN-3-YL)-L-ALANINE'>HQA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3fca|  PDB=3fca  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fca OCA], [https://pdbe.org/3fca PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fca RCSB], [https://www.ebi.ac.uk/pdbsum/3fca PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fca ProSAT]</span></td></tr>
 
</table>
===Genetic Incorporation of a Metal-ion Chelating Amino Acid into proteins as biophysical probe===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
<!--
  <jmolCheckbox>
The line below this paragraph, {{ABSTRACT_PUBMED_19193005}}, adds the Publication Abstract to the page
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fc/3fca_consurf.spt"</scriptWhenChecked>
(as it appears on PubMed at http://www.pubmed.gov), where 19193005 is the PubMed ID number.
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-->
    <text>to colour the structure by Evolutionary Conservation</text>
{{ABSTRACT_PUBMED_19193005}}
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fca ConSurf].
==About this Structure==
<div style="clear:both"></div>
3FCA is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FCA OCA].  
__TOC__
 
</StructureSection>
==Reference==
[[Category: Large Structures]]
<ref group="xtra">PMID:19193005</ref><references group="xtra"/>
[[Category: Cysteine synthase]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Lee, H.]]
[[Category: Lee H]]
[[Category: Schultz, P G.]]
[[Category: Schultz PG]]
[[Category: Spraggon, G.]]
[[Category: Spraggon G]]
[[Category: Wang, F.]]
[[Category: Wang F]]
[[Category: Crystallography]]
[[Category: Heavy metal]]
[[Category: Metal binding]]
[[Category: Phasing]]
[[Category: Transferase]]
[[Category: Unnatural amino acid]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 22 12:07:32 2010''