1kn5: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
New page: left|200px<br /><applet load="1kn5" size="450" color="white" frame="true" align="right" spinBox="true" caption="1kn5" /> '''SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FR...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1kn5.gif|left|200px]]<br /><applet load="1kn5" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1kn5" />
'''SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FROM SACCHAROMYCES CEREVISIAE'''<br />


==About this Structure==
==SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FROM SACCHAROMYCES CEREVISIAE==
1KN5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1KN5 OCA].  
<StructureSection load='1kn5' size='340' side='right'caption='[[1kn5]]' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[1kn5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KN5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KN5 FirstGlance]. <br>
1H, 13C and 15N resonance assignments and secondary structure of ADR6 DNA-binding domain., Tu X, Wu J, Xu Y, Shi Y, J Biomol NMR. 2001 Oct;21(2):187-8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11727987 11727987]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kn5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kn5 OCA], [https://pdbe.org/1kn5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kn5 RCSB], [https://www.ebi.ac.uk/pdbsum/1kn5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kn5 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SWI1_YEAST SWI1_YEAST] Involved in transcriptional activation. Component of the SWI/SNF complex, an ATP-dependent chromatin remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kn/1kn5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kn5 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Single protein]]
[[Category: Shi Y]]
[[Category: Shi, Y.]]
[[Category: Tu X]]
[[Category: Tu, X.]]
[[Category: Wu J]]
[[Category: Wu, J.]]
[[Category: Xu Y]]
[[Category: Xu, Y.]]
[[Category: adr6]]
[[Category: arid domain]]
[[Category: dna-binding]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 19:22:51 2007''
Retrieved from "https://proteopedia.org/1kn5"