2j27: Difference between revisions

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{{Seed}}
[[Image:2j27.png|left|200px]]


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==The functional role of the conserved active site proline of triosephosphate isomerase==
The line below this paragraph, containing "STRUCTURE_2j27", creates the "Structure Box" on the page.
<StructureSection load='2j27' size='340' side='right'caption='[[2j27]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2j27]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei_brucei Trypanosoma brucei brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J27 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J27 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.15&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PGA:2-PHOSPHOGLYCOLIC+ACID'>PGA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_2j27|  PDB=2j27 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j27 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j27 OCA], [https://pdbe.org/2j27 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j27 RCSB], [https://www.ebi.ac.uk/pdbsum/2j27 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j27 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TPIS_TRYBB TPIS_TRYBB]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j2/2j27_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j27 ConSurf].
<div style="clear:both"></div>


===THE FUNCTIONAL ROLE OF THE CONSERVED ACTIVE SITE PROLINE OF TRIOSEPHOSPHATE ISOMERASE===
==See Also==
 
*[[Triose phosphate isomerase 3D structures|Triose phosphate isomerase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_17176070}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 17176070 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_17176070}}
 
==About this Structure==
2J27 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Trypanosoma_brucei_brucei Trypanosoma brucei brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J27 OCA].
 
==Reference==
Functional role of the conserved active site proline of triosephosphate isomerase., Casteleijn MG, Alahuhta M, Groebel K, El-Sayed I, Augustyns K, Lambeir AM, Neubauer P, Wierenga RK, Biochemistry. 2006 Dec 26;45(51):15483-94. Epub 2006 Dec 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17176070 17176070]
[[Category: Single protein]]
[[Category: Triose-phosphate isomerase]]
[[Category: Trypanosoma brucei brucei]]
[[Category: Trypanosoma brucei brucei]]
[[Category: Alahuhta, M.]]
[[Category: Alahuhta M]]
[[Category: Augustyns, K.]]
[[Category: Augustyns K]]
[[Category: Casteleijn, M G.]]
[[Category: Casteleijn MG]]
[[Category: El-Sayed, I.]]
[[Category: El-Sayed I]]
[[Category: Groebel, K.]]
[[Category: Groebel K]]
[[Category: Lambeir, A M.]]
[[Category: Lambeir AM]]
[[Category: Neubauer, P.]]
[[Category: Neubauer P]]
[[Category: Wierenga, R K.]]
[[Category: Wierenga RK]]
[[Category: 2-phospho glycolate]]
[[Category: 2pg]]
[[Category: Atomic resolution]]
[[Category: Fatty acid biosynthesis]]
[[Category: Gluconeogenesis]]
[[Category: Glycolysis]]
[[Category: Glycosome]]
[[Category: Isomerase]]
[[Category: Lipid synthesis]]
[[Category: Loop7]]
[[Category: Pentose shunt]]
[[Category: Point mutation]]
[[Category: Protein engineering]]
[[Category: Tim]]
[[Category: Tim-barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 10:00:56 2008''
Retrieved from "https://proteopedia.org/2j27"