2kym: Difference between revisions

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{{Seed}}
[[Image:2kym.jpg|left|200px]]


<!--
==Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide==
The line below this paragraph, containing "STRUCTURE_2kym", creates the "Structure Box" on the page.
<StructureSection load='2kym' size='340' side='right'caption='[[2kym]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2kym]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lodderomyces_elongisporus_NRRL_YB-4239 Lodderomyces elongisporus NRRL YB-4239] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KYM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kym OCA], [https://pdbe.org/2kym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kym RCSB], [https://www.ebi.ac.uk/pdbsum/2kym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kym ProSAT]</span></td></tr>
{{STRUCTURE_2kym|  PDB=2kym  |  SCENE=  }}
</table>
 
== Function ==
===Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide===
[https://www.uniprot.org/uniprot/A5E3P5_LODEL A5E3P5_LODEL]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2KYM is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Lodderomyces_elongisporus Lodderomyces elongisporus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KYM OCA].  
  <jmolCheckbox>
[[Category: Lodderomyces elongisporus]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ky/2kym_consurf.spt"</scriptWhenChecked>
[[Category: Davidson, A R.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Gorelik, M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Muhandiram, R.]]
  </jmolCheckbox>
[[Category: Bem1p]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kym ConSurf].
[[Category: Cdc42p-interacting]]
<div style="clear:both"></div>
[[Category: Scaffold]]
__TOC__
[[Category: Sh3 domain]]
</StructureSection>
[[Category: Sh3-ci]]
[[Category: Large Structures]]
[[Category: Signaling protein]]
[[Category: Lodderomyces elongisporus NRRL YB-4239]]
[[Category: Ste20p prr]]
[[Category: Saccharomyces cerevisiae]]
 
[[Category: Davidson AR]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 23 08:46:29 2010''
[[Category: Gorelik M]]
[[Category: Muhandiram R]]
Retrieved from "https://proteopedia.org/2kym"