2l15: Difference between revisions
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==Solution Structure of Cold Shock Protein CspA Using Combined NMR and CS-Rosetta method== | |||
<StructureSection load='2l15' size='340' side='right'caption='[[2l15]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2l15]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L15 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L15 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l15 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l15 OCA], [https://pdbe.org/2l15 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l15 RCSB], [https://www.ebi.ac.uk/pdbsum/2l15 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l15 ProSAT]</span></td></tr> | |||
== | </table> | ||
[[2l15]] is a 1 chain structure with sequence from [ | == Function == | ||
[https://www.uniprot.org/uniprot/CSPA_ECOLI CSPA_ECOLI] Binds to and stimulates the transcription of the CCAAT-containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'. | |||
== | == Evolutionary Conservation == | ||
< | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l1/2l15_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2l15 ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: Baker | [[Category: Large Structures]] | ||
[[Category: Inouye | [[Category: Baker D]] | ||
[[Category: Montelione | [[Category: Inouye M]] | ||
[[Category: Raman | [[Category: Montelione GT]] | ||
[[Category: Roth | [[Category: Raman S]] | ||
[[Category: Schneider | [[Category: Roth MJ]] | ||
[[Category: Shen | [[Category: Schneider WM]] | ||
[[Category: Tang | [[Category: Shen Y]] | ||
[[Category: Tang Y]] | |||
Latest revision as of 06:51, 1 May 2024
Solution Structure of Cold Shock Protein CspA Using Combined NMR and CS-Rosetta method
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