1yb2: Difference between revisions

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[[Image:1yb2.gif|left|200px]]


{{Structure
==Structure of a putative methyltransferase from Thermoplasma acidophilum.==
|PDB= 1yb2 |SIZE=350|CAPTION= <scene name='initialview01'>1yb2</scene>, resolution 2.01&Aring;
<StructureSection load='1yb2' size='340' side='right'caption='[[1yb2]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[1yb2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum_DSM_1728 Thermoplasma acidophilum DSM 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YB2 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
|GENE= Ta0852 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273075 Thermoplasma acidophilum DSM 1728])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2519 GCD14]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yb2 OCA], [https://pdbe.org/1yb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yb2 RCSB], [https://www.ebi.ac.uk/pdbsum/1yb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yb2 ProSAT], [https://www.topsan.org/Proteins/MCSG/1yb2 TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yb2 OCA], [http://www.ebi.ac.uk/pdbsum/1yb2 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1yb2 RCSB]</span>
</table>
}}
== Function ==
 
[https://www.uniprot.org/uniprot/Q9HJW1_THEAC Q9HJW1_THEAC]
'''Structure of a putative methyltransferase from Thermoplasma acidophilum.'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
1YB2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum_dsm_1728 Thermoplasma acidophilum dsm 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YB2 OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yb/1yb2_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Thermoplasma acidophilum dsm 1728]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Cuff, M E.]]
  </jmolCheckbox>
[[Category: Edwards, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yb2 ConSurf].
[[Category: Joachimiak, A.]]
<div style="clear:both"></div>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
__TOC__
[[Category: Sanishvili, R.]]
</StructureSection>
[[Category: Savchenko, A.]]
[[Category: Large Structures]]
[[Category: Xu, X.]]
[[Category: Thermoplasma acidophilum DSM 1728]]
[[Category: mcsg]]
[[Category: Cuff ME]]
[[Category: methyltransferase]]
[[Category: Edwards A]]
[[Category: midwest center for structural genomic]]
[[Category: Joachimiak A]]
[[Category: protein structure initiative]]
[[Category: Sanishvili R]]
[[Category: psi]]
[[Category: Savchenko A]]
[[Category: structural genomic]]
[[Category: Xu X]]
[[Category: thermoplasma acidophilum]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:14:21 2008''

Latest revision as of 08:01, 15 May 2024

Structure of a putative methyltransferase from Thermoplasma acidophilum.

1yb2, resolution 2.01Å

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