2djk: Difference between revisions

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New page: left|200px<br /><applet load="2djk" size="450" color="white" frame="true" align="right" spinBox="true" caption="2djk" /> '''Solution structure of the b' domain of therm...
 
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[[Image:2djk.gif|left|200px]]<br /><applet load="2djk" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2djk" />
'''Solution structure of the b' domain of thermophilic fungal protein disulfide isomerase'''<br />


==About this Structure==
==Solution structure of the b' domain of thermophilic fungal protein disulfide isomerase==
2DJK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Humicola_insolens Humicola insolens]. This structure superseeds the now removed PDB entry 1V52. Active as [http://en.wikipedia.org/wiki/Protein_disulfide-isomerase Protein disulfide-isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.4.1 5.3.4.1] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2DJK OCA].  
<StructureSection load='2djk' size='340' side='right'caption='[[2djk]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2djk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Humicola_insolens Humicola insolens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1v52 1v52]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DJK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DJK FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2djk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2djk OCA], [https://pdbe.org/2djk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2djk RCSB], [https://www.ebi.ac.uk/pdbsum/2djk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2djk ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PDI_HUMIN PDI_HUMIN] Participates in the folding of proteins containing disulfide bonds, may be involved in glycosylation, prolyl hydroxylation and triglyceride transfer (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/2djk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2djk ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Humicola insolens]]
[[Category: Humicola insolens]]
[[Category: Protein disulfide-isomerase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Kato K]]
[[Category: Kato, K.]]
[[Category: Yamaguchi Y]]
[[Category: Yamaguchi, Y.]]
[[Category: thioredoxin fold]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 09:38:07 2007''
Retrieved from "https://proteopedia.org/2djk"