1ybf: Difference between revisions

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[[Image:1ybf.gif|left|200px]]<br /><applet load="1ybf" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1ybf, resolution 2.9&Aring;" />
'''Crystal structure of AMP nucleosidase from Bacteroides thetaiotaomicron VPI-5482'''<br />


==About this Structure==
==Crystal structure of AMP nucleosidase from Bacteroides thetaiotaomicron VPI-5482==
1YBF is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YBF OCA].  
<StructureSection load='1ybf' size='340' side='right'caption='[[1ybf]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
[[Category: Bacteroides thetaiotaomicron]]
== Structural highlights ==
[[Category: Protein complex]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YBF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YBF FirstGlance]. <br>
[[Category: Burley, S K.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
[[Category: Krishnamurthy, N R.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ybf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ybf OCA], [https://pdbe.org/1ybf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ybf RCSB], [https://www.ebi.ac.uk/pdbsum/1ybf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ybf ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1ybf TOPSAN]</span></td></tr>
[[Category: Swaminathan, S.]]
</table>
[[Category: amp nucleosidase]]
== Evolutionary Conservation ==
[[Category: bacteroides thetaiotaomicron]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: new york structural genomix research consortium]]
Check<jmol>
[[Category: nysgxrc]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yb/1ybf_consurf.spt"</scriptWhenChecked>
[[Category: psi]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: t1840]]
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ybf ConSurf].
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:03:39 2008''
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Burley SK]]
[[Category: Krishnamurthy NR]]
[[Category: Swaminathan S]]
Retrieved from "https://proteopedia.org/1ybf"