2npn: Difference between revisions

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[[Image:2npn.gif|left|200px]]


{{Structure
==Crystal structure of putative cobalamin synthesis related protein (CobF) from Corynebacterium diphtheriae==
|PDB= 2npn |SIZE=350|CAPTION= <scene name='initialview01'>2npn</scene>, resolution 1.60&Aring;
<StructureSection load='2npn' size='340' side='right'caption='[[2npn]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
<table><tr><td colspan='2'>[[2npn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NPN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NPN FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2npn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2npn OCA], [https://pdbe.org/2npn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2npn RCSB], [https://www.ebi.ac.uk/pdbsum/2npn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2npn ProSAT], [https://www.topsan.org/Proteins/MCSG/2npn TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of putative cobalamin synthesis related protein (CobF) from Corynebacterium diphtheriae'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q6NIF5_CORDI Q6NIF5_CORDI]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2NPN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NPN OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/np/2npn_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2npn ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Corynebacterium diphtheriae]]
[[Category: Corynebacterium diphtheriae]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Clancy, S.]]
[[Category: Clancy S]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Nocek B]]
[[Category: Nocek, B.]]
[[Category: Zhou M]]
[[Category: Zhou, M.]]
[[Category: GOL]]
[[Category: MG]]
[[Category: SAM]]
[[Category: cobalamin synthesis related protein]]
[[Category: cobf]]
[[Category: mad]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: s-adenosylmethionine]]
[[Category: sam]]
[[Category: structural genomic]]
 
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