2nrk: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2nrk.gif|left|200px]]


{{Structure
==Crystal structure of conserved protein GrpB from Enterococcus faecalis==
|PDB= 2nrk |SIZE=350|CAPTION= <scene name='initialview01'>2nrk</scene>, resolution 1.65&Aring;
<StructureSection load='2nrk' size='340' side='right'caption='[[2nrk]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2nrk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NRK FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
|GENE= UPF0157 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1351 Enterococcus faecalis])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2320 GrpB]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nrk OCA], [https://pdbe.org/2nrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nrk RCSB], [https://www.ebi.ac.uk/pdbsum/2nrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nrk ProSAT], [https://www.topsan.org/Proteins/MCSG/2nrk TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nrk OCA], [http://www.ebi.ac.uk/pdbsum/2nrk PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2nrk RCSB]</span>
</table>
}}
== Function ==
 
[https://www.uniprot.org/uniprot/Q837C3_ENTFA Q837C3_ENTFA]
'''Crystal structure of conserved protein GrpB from Enterococcus faecalis'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2NRK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NRK OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/2nrk_consurf.spt"</scriptWhenChecked>
[[Category: Enterococcus faecalis]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Bargassa, M.]]
  </jmolCheckbox>
[[Category: Cuff, M E.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nrk ConSurf].
[[Category: Joachimiak, A.]]
<div style="clear:both"></div>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
__TOC__
[[Category: Mulligan, R.]]
</StructureSection>
[[Category: enterococcus faecali]]
[[Category: Enterococcus faecalis V583]]
[[Category: glutamate-rich protein]]
[[Category: Large Structures]]
[[Category: mcsg]]
[[Category: Bargassa M]]
[[Category: midwest center for structural genomic]]
[[Category: Cuff ME]]
[[Category: pfam04229]]
[[Category: Joachimiak A]]
[[Category: protein structure initiative]]
[[Category: Mulligan R]]
[[Category: psi-2]]
[[Category: upf0157]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:34:44 2008''

Latest revision as of 05:22, 17 October 2024

Crystal structure of conserved protein GrpB from Enterococcus faecalis

2nrk, resolution 1.65Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA