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[[Image:1ppo.gif|left|200px]]


{{Structure
==DETERMINATION OF THE STRUCTURE OF PAPAYA PROTEASE OMEGA==
|PDB= 1ppo |SIZE=350|CAPTION= <scene name='initialview01'>1ppo</scene>, resolution 1.8&Aring;
<StructureSection load='1ppo' size='340' side='right'caption='[[1ppo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=HG:MERCURY (II) ION'>HG</scene>
<table><tr><td colspan='2'>[[1ppo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Carica_papaya Carica papaya]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PPO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PPO FirstGlance]. <br>
|ACTIVITY= [http://en.wikipedia.org/wiki/Caricain Caricain], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.30 3.4.22.30]  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ppo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ppo OCA], [https://pdbe.org/1ppo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ppo RCSB], [https://www.ebi.ac.uk/pdbsum/1ppo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ppo ProSAT]</span></td></tr>
 
</table>
'''DETERMINATION OF THE STRUCTURE OF PAPAYA PROTEASE OMEGA'''
== Function ==
 
[https://www.uniprot.org/uniprot/PAPA3_CARPA PAPA3_CARPA]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1PPO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Carica_papaya Carica papaya]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PPO OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pp/1ppo_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ppo ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Carica papaya]]
[[Category: Carica papaya]]
[[Category: Caricain]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Goodenough PW]]
[[Category: Goodenough, P W.]]
[[Category: Harris GW]]
[[Category: Harris, G W.]]
[[Category: Pickersgill RW]]
[[Category: Pickersgill, R W.]]
[[Category: Rizkallah PJ]]
[[Category: Rizkallah, P.]]
[[Category: HG]]
[[Category: hydrolase(thiol protease)]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:27:24 2008''