2dx6: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2dx6.png|left|200px]]


{{STRUCTURE_2dx6|  PDB=2dx6  |  SCENE=  }}
==Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8==
 
<StructureSection load='2dx6' size='340' side='right'caption='[[2dx6]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
===Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2dx6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DX6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DX6 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[2dx6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DX6 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dx6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dx6 OCA], [https://pdbe.org/2dx6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dx6 RCSB], [https://www.ebi.ac.uk/pdbsum/2dx6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dx6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dx6 TOPSAN]</span></td></tr>
[[Category: Thermus thermophilus]]
</table>
[[Category: Kishishita, S.]]
== Function ==
[[Category: Kuramitsu, S.]]
[https://www.uniprot.org/uniprot/Q5SM11_THET8 Q5SM11_THET8]  
[[Category: Murayama, K.]]
== Evolutionary Conservation ==
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Shirouzu, M.]]
Check<jmol>
[[Category: Terada, T.]]
  <jmolCheckbox>
[[Category: Yokoyama, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/2dx6_consurf.spt"</scriptWhenChecked>
[[Category: Conserved hypothetical protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: National project on protein structural and functional analyse]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Nppsfa]]
  </jmolCheckbox>
[[Category: Riken structural genomics/proteomics initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dx6 ConSurf].
[[Category: Rsgi]]
<div style="clear:both"></div>
[[Category: Structural genomic]]
__TOC__
[[Category: Unknown function]]
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Kishishita S]]
[[Category: Kuramitsu S]]
[[Category: Murayama K]]
[[Category: Shirouzu M]]
[[Category: Terada T]]
[[Category: Yokoyama S]]

Latest revision as of 07:56, 30 October 2024

Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8

2dx6, resolution 1.78Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA