2hmc: Difference between revisions

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New page: left|200px<br /><applet load="2hmc" size="350" color="white" frame="true" align="right" spinBox="true" caption="2hmc, resolution 1.90Å" /> '''The Crystal Structur...
 
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[[Image:2hmc.jpg|left|200px]]<br /><applet load="2hmc" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2hmc, resolution 1.90&Aring;" />
'''The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens'''<br />


==About this Structure==
==The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens==
2HMC is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HMC OCA].  
<StructureSection load='2hmc' size='340' side='right'caption='[[2hmc]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Agrobacterium tumefaciens]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2hmc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HMC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HMC FirstGlance]. <br>
[[Category: Joachimiak, A.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Kim, Y.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hmc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hmc OCA], [https://pdbe.org/2hmc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hmc RCSB], [https://www.ebi.ac.uk/pdbsum/2hmc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hmc ProSAT], [https://www.topsan.org/Proteins/MCSG/2hmc TOPSAN]</span></td></tr>
[[Category: Savchenko, A.]]
</table>
[[Category: Xu, X.]]
== Function ==
[[Category: Zhang, R.]]
[https://www.uniprot.org/uniprot/A9CGZ4_AGRFC A9CGZ4_AGRFC]  
[[Category: Zheng, H.]]
== Evolutionary Conservation ==
[[Category: MG]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: alpha-beta barrel (tim barrel)]]
Check<jmol>
[[Category: mcsg]]
  <jmolCheckbox>
[[Category: midwest center for structural genomics]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hm/2hmc_consurf.spt"</scriptWhenChecked>
[[Category: protein structure initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: psi-2]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomics]]
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hmc ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:24:00 2008''
==See Also==
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
__TOC__
</StructureSection>
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]
[[Category: Joachimiak A]]
[[Category: Kim Y]]
[[Category: Savchenko A]]
[[Category: Xu X]]
[[Category: Zhang R]]
[[Category: Zheng H]]
Retrieved from "https://proteopedia.org/2hmc"