2oer: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2oer.png|left|200px]]


<!--
==Probable Transcriptional Regulator from Pseudomonas aeruginosa==
The line below this paragraph, containing "STRUCTURE_2oer", creates the "Structure Box" on the page.
<StructureSection load='2oer' size='340' side='right'caption='[[2oer]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2oer]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OER OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OER FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2oer|  PDB=2oer  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oer FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oer OCA], [https://pdbe.org/2oer PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oer RCSB], [https://www.ebi.ac.uk/pdbsum/2oer PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oer ProSAT], [https://www.topsan.org/Proteins/MCSG/2oer TOPSAN]</span></td></tr>
 
</table>
===Probable Transcriptional Regulator from Pseudomonas aeruginosa===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9I3U1_PSEAE Q9I3U1_PSEAE]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2OER is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OER OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oe/2oer_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oer ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Single protein]]
[[Category: Edwards A]]
[[Category: Edwards, A.]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A.]]
[[Category: Kagan O]]
[[Category: Kagan, O.]]
[[Category: Kim Y]]
[[Category: Kim, Y.]]
[[Category: Savchenko A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Skarina T]]
[[Category: Savchenko, A.]]
[[Category: Skarina, T.]]
[[Category: Alpha-beta]]
[[Category: Helix-turn-helix]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Transcription]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 02:04:41 2008''
Retrieved from "https://proteopedia.org/2oer"