2opk: Difference between revisions

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{{Seed}}
[[Image:2opk.png|left|200px]]


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==CRYSTAL STRUCTURE OF A PUTATIVE MANNOSE-6-PHOSPHATE ISOMERASE (REUT_A1446) FROM RALSTONIA EUTROPHA JMP134 AT 2.10 A RESOLUTION==
The line below this paragraph, containing "STRUCTURE_2opk", creates the "Structure Box" on the page.
<StructureSection load='2opk' size='340' side='right'caption='[[2opk]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2opk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_pinatubonensis_JMP134 Cupriavidus pinatubonensis JMP134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OPK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OPK FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2opk|  PDB=2opk |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2opk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2opk OCA], [https://pdbe.org/2opk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2opk RCSB], [https://www.ebi.ac.uk/pdbsum/2opk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2opk ProSAT], [https://www.topsan.org/Proteins/JCSG/2opk TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of a protein with a cupin-like fold and unknown function (YP_295660.1) from Ralstonia eutropha JMP134 at 2.10 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/Q471W7_CUPPJ Q471W7_CUPPJ]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2OPK is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Cupriavidus_necator Cupriavidus necator]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OPK OCA].  
Check<jmol>
[[Category: Cupriavidus necator]]
  <jmolCheckbox>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/op/2opk_consurf.spt"</scriptWhenChecked>
[[Category: Hypothetical protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Jcsg]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joint center for structural genomic]]
  </jmolCheckbox>
[[Category: Protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2opk ConSurf].
[[Category: Psi-2]]
<div style="clear:both"></div>
[[Category: Structural genomic]]
__TOC__
[[Category: Yp_295660 1]]
</StructureSection>
 
[[Category: Cupriavidus pinatubonensis JMP134]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:38:03 2008''
[[Category: Large Structures]]

Latest revision as of 08:25, 30 October 2024

CRYSTAL STRUCTURE OF A PUTATIVE MANNOSE-6-PHOSPHATE ISOMERASE (REUT_A1446) FROM RALSTONIA EUTROPHA JMP134 AT 2.10 A RESOLUTION

2opk, resolution 2.10Å

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