2owt: Difference between revisions

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New page: left|200px<br /><applet load="2owt" size="350" color="white" frame="true" align="right" spinBox="true" caption="2owt, resolution 2.40Å" /> '''Crystal structure of...
 
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[[Image:2owt.jpg|left|200px]]<br /><applet load="2owt" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2owt, resolution 2.40&Aring;" />
'''Crystal structure of Bordetella pertussis holo ferric binding protein with bound synergistic carbonate anion'''<br />


==About this Structure==
==Crystal structure of Bordetella pertussis holo ferric binding protein with bound synergistic carbonate anion==
2OWT is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis] with <scene name='pdbligand=FE:'>FE</scene> and <scene name='pdbligand=CO3:'>CO3</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Fe+Binding+Site+For+Residue+A+324'>AC1</scene> and <scene name='pdbsite=AC2:Co3+Binding+Site+For+Residue+A+325'>AC2</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OWT OCA].  
<StructureSection load='2owt' size='340' side='right'caption='[[2owt]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
[[Category: Bordetella pertussis]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2owt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_pertussis_Tohama_I Bordetella pertussis Tohama I]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OWT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OWT FirstGlance]. <br>
[[Category: Murphy, M E.P.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
[[Category: Tom-Yew, S A.L.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
[[Category: CO3]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2owt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2owt OCA], [https://pdbe.org/2owt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2owt RCSB], [https://www.ebi.ac.uk/pdbsum/2owt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2owt ProSAT]</span></td></tr>
[[Category: FE]]
</table>
[[Category: alpha-beta-alpha units]]
== Function ==
[[Category: anti-parallel beta-strands hinge region]]
[https://www.uniprot.org/uniprot/Q7VXW9_BORPE Q7VXW9_BORPE]  
[[Category: metal binding protein]]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ow/2owt_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2owt ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 27 07:58:40 2008''
==See Also==
*[[Ferric-binding protein|Ferric-binding protein]]
__TOC__
</StructureSection>
[[Category: Bordetella pertussis Tohama I]]
[[Category: Large Structures]]
[[Category: Murphy MEP]]
[[Category: Tom-Yew SAL]]