2qsx: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
New page: left|200px<br /><applet load="2qsx" size="350" color="white" frame="true" align="right" spinBox="true" caption="2qsx, resolution 1.64Å" /> '''Crystal structure of...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2qsx.jpg|left|200px]]<br /><applet load="2qsx" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2qsx, resolution 1.64&Aring;" />
'''Crystal structure of putative transcriptional regulator LysR From Vibrio parahaemolyticus'''<br />


==About this Structure==
==Crystal structure of putative transcriptional regulator LysR From Vibrio parahaemolyticus==
2QSX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSX OCA].
<StructureSection load='2qsx' size='340' side='right'caption='[[2qsx]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Vibrio parahaemolyticus rimd 2210633]]
<table><tr><td colspan='2'>[[2qsx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QSX FirstGlance]. <br>
[[Category: Abdullah, J.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.64&#8491;</td></tr>
[[Category: Binkowski, T.A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Joachimiak, A.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qsx OCA], [https://pdbe.org/2qsx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qsx RCSB], [https://www.ebi.ac.uk/pdbsum/2qsx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qsx ProSAT], [https://www.topsan.org/Proteins/MCSG/2qsx TOPSAN]</span></td></tr>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
</table>
[[Category: Wu, R.]]
== Function ==
[[Category: SO4]]
[https://www.uniprot.org/uniprot/Q87RY9_VIBPA Q87RY9_VIBPA]  
[[Category: dna-binding]]
== Evolutionary Conservation ==
[[Category: lysr family]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: mcsg]]
Check<jmol>
[[Category: midwest center for structural genomics]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qs/2qsx_consurf.spt"</scriptWhenChecked>
[[Category: psi-2]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: the putative transcriptional regulator]]
  </jmolCheckbox>
[[Category: transcription regulation]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qsx ConSurf].
 
<div style="clear:both"></div>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:47:08 2008''
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
[[Category: Abdullah J]]
[[Category: Binkowski TA]]
[[Category: Joachimiak A]]
[[Category: Wu R]]
Retrieved from "https://proteopedia.org/2qsx"