2qyt: Difference between revisions

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{{Seed}}
[[Image:2qyt.png|left|200px]]


<!--
==Crystal structure of 2-dehydropantoate 2-reductase from Porphyromonas gingivalis W83==
The line below this paragraph, containing "STRUCTURE_2qyt", creates the "Structure Box" on the page.
<StructureSection load='2qyt' size='340' side='right'caption='[[2qyt]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qyt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QYT FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_2qyt|  PDB=2qyt  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qyt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qyt OCA], [https://pdbe.org/2qyt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qyt RCSB], [https://www.ebi.ac.uk/pdbsum/2qyt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qyt ProSAT], [https://www.topsan.org/Proteins/MCSG/2qyt TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of 2-dehydropantoate 2-reductase from Porphyromonas gingivalis W83===
== Function ==
 
[https://www.uniprot.org/uniprot/Q7MT04_PORGI Q7MT04_PORGI] Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (By similarity).[RuleBase:RU003776]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2QYT is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis_w83 Porphyromonas gingivalis w83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYT OCA].  
Check<jmol>
[[Category: Porphyromonas gingivalis w83]]
  <jmolCheckbox>
[[Category: Joachimiak, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qy/2qyt_consurf.spt"</scriptWhenChecked>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Moy, S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Tan, K.]]
  </jmolCheckbox>
[[Category: Wu, R.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qyt ConSurf].
[[Category: 2-dehydropantoate 2-reductase]]
<div style="clear:both"></div>
[[Category: Apc81190]]
__TOC__
[[Category: Mcsg]]
</StructureSection>
[[Category: Midwest center for structural genomic]]
[[Category: Large Structures]]
[[Category: Oxidoreductase]]
[[Category: Porphyromonas gingivalis W83]]
[[Category: Porphyromonas gingivalis w83]]
[[Category: Joachimiak A]]
[[Category: Protein structure initiative]]
[[Category: Moy S]]
[[Category: Psi-2]]
[[Category: Tan K]]
[[Category: Structural genomic]]
[[Category: Wu R]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:59:39 2008''
Retrieved from "https://proteopedia.org/2qyt"