2r1f: Difference between revisions

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[[Image:2r1f.jpg|left|200px]]


{{Structure
==Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli==
|PDB= 2r1f |SIZE=350|CAPTION= <scene name='initialview01'>2r1f</scene>, resolution 2.21&Aring;
<StructureSection load='2r1f' size='340' side='right'caption='[[2r1f]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R1F FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.21&#8491;</td></tr>
|GENE= yceG, b1097, JW1083 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K12])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10270 PRK10270]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1f OCA], [https://pdbe.org/2r1f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r1f RCSB], [https://www.ebi.ac.uk/pdbsum/2r1f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1f ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2r1f TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1f OCA], [http://www.ebi.ac.uk/pdbsum/2r1f PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2r1f RCSB]</span>
</table>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1f_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
2R1F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1F OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Escherichia coli k12]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r1f ConSurf].
[[Category: Almo, S C.]]
<div style="clear:both"></div>
[[Category: Burley, S K.]]
__TOC__
[[Category: Gheyi, T.]]
</StructureSection>
[[Category: Lau, C.]]
[[Category: Large Structures]]
[[Category: Maletic, M.]]
[[Category: Almo SC]]
[[Category: Meyer, A J.]]
[[Category: Burley SK]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Gheyi T]]
[[Category: Patskovsky, Y.]]
[[Category: Lau C]]
[[Category: Ramagopal, U A.]]
[[Category: Maletic M]]
[[Category: Rutter, M.]]
[[Category: Meyer AJ]]
[[Category: Sauder, J M.]]
[[Category: Patskovsky Y]]
[[Category: Smith, D.]]
[[Category: Ramagopal UA]]
[[Category: Toro, R.]]
[[Category: Rutter M]]
[[Category: Wasserman, S.]]
[[Category: Sauder JM]]
[[Category: new york structural genomix research consortium]]
[[Category: Smith D]]
[[Category: nysgxrc]]
[[Category: Toro R]]
[[Category: pfam 02618]]
[[Category: Wasserman S]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:44:55 2008''

Latest revision as of 08:36, 30 October 2024

Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli

2r1f, resolution 2.21Å

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