2zum: Difference between revisions

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{{Seed}}
[[Image:2zum.png|left|200px]]


<!--
==Functional Analysis of Hyperthermophilic Endocellulase from the Archaeon Pyrococcus horikoshii==
The line below this paragraph, containing "STRUCTURE_2zum", creates the "Structure Box" on the page.
<StructureSection load='2zum' size='340' side='right'caption='[[2zum]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2zum]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZUM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZUM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2zum|  PDB=2zum  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zum OCA], [https://pdbe.org/2zum PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zum RCSB], [https://www.ebi.ac.uk/pdbsum/2zum PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zum ProSAT]</span></td></tr>
 
</table>
===Functional Analysis of Hyperthermophilic Endocellulase from the Archaeon Pyrococcus horikoshii===
== Function ==
 
[https://www.uniprot.org/uniprot/O58925_PYRHO O58925_PYRHO]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2ZUM is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZUM OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zu/2zum_consurf.spt"</scriptWhenChecked>
<ref group="xtra">PMID:19847920</ref><references group="xtra"/>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Cellulase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Pyrococcus horikoshii]]
  </jmolCheckbox>
[[Category: Ishikawa, K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zum ConSurf].
[[Category: Kim, H W.]]
<div style="clear:both"></div>
[[Category: Hydrolase]]
__TOC__
[[Category: Tim barrel]]
</StructureSection>
 
[[Category: Large Structures]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 11 22:49:29 2009''
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Ishikawa K]]
[[Category: Kim H-W]]
Retrieved from "https://proteopedia.org/2zum"