3c2b: Difference between revisions

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[[Image:3c2b.jpg|left|200px]]<br /><applet load="3c2b" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3c2b, resolution 2.100&Aring;" />
'''Crystal structure of TetR transcriptional regulator from Agrobacterium tumefaciens'''<br />


==About this Structure==
==Crystal structure of TetR transcriptional regulator from Agrobacterium tumefaciens==
3C2B is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58] with <scene name='pdbligand=FMT:'>FMT</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Sites: <scene name='pdbsite=AC1:Fmt+Binding+Site+For+Residue+B+301'>AC1</scene> and <scene name='pdbsite=AC2:Fmt+Binding+Site+For+Residue+A+302'>AC2</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2B OCA].
<StructureSection load='3c2b' size='340' side='right'caption='[[3c2b]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
[[Category: Agrobacterium tumefaciens str. c58]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3c2b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C2B FirstGlance]. <br>
[[Category: Edwards, A.M.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
[[Category: Joachimiak, A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2b OCA], [https://pdbe.org/3c2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c2b RCSB], [https://www.ebi.ac.uk/pdbsum/3c2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c2b ProSAT], [https://www.topsan.org/Proteins/MCSG/3c2b TOPSAN]</span></td></tr>
[[Category: Osipiuk, J.]]
</table>
[[Category: Savchenko, A.]]
== Function ==
[[Category: Skarina, T.]]
[https://www.uniprot.org/uniprot/A9CID8_AGRFC A9CID8_AGRFC]  
[[Category: Zheng, H.]]
== Evolutionary Conservation ==
[[Category: FMT]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: apc5923]]
Check<jmol>
[[Category: mcsg]]
  <jmolCheckbox>
[[Category: midwest center for structural genomics]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c2b_consurf.spt"</scriptWhenChecked>
[[Category: protein structure initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: psi-2]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomics]]
  </jmolCheckbox>
[[Category: tetr]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c2b ConSurf].
[[Category: transcription]]
<div style="clear:both"></div>
[[Category: transcription regulator]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 13 08:15:48 2008''
==See Also==
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
__TOC__
</StructureSection>
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]
[[Category: Edwards AM]]
[[Category: Joachimiak A]]
[[Category: Osipiuk J]]
[[Category: Savchenko A]]
[[Category: Skarina T]]
[[Category: Zheng H]]
Retrieved from "https://proteopedia.org/3c2b"