3c37: Difference between revisions

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New page: left|200px<br /><applet load="3c37" size="350" color="white" frame="true" align="right" spinBox="true" caption="3c37, resolution 1.70Å" /> '''X-ray structure of t...
 
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[[Image:3c37.jpg|left|200px]]<br /><applet load="3c37" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3c37, resolution 1.70&Aring;" />
'''X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A'''<br />


==About this Structure==
==X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A==
3C37 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens_pca Geobacter sulfurreducens pca] with <scene name='pdbligand=ZN:'>ZN</scene> and <scene name='pdbligand=PEG:'>PEG</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Zn+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+B+301'>AC2</scene>, <scene name='pdbsite=AC3:Peg+Binding+Site+For+Residue+A+400'>AC3</scene> and <scene name='pdbsite=AC4:Peg+Binding+Site+For+Residue+B+400'>AC4</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C37 OCA].
<StructureSection load='3c37' size='340' side='right'caption='[[3c37]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
[[Category: Geobacter sulfurreducens pca]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3c37]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens_PCA Geobacter sulfurreducens PCA]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C37 FirstGlance]. <br>
[[Category: Acton, T.B.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
[[Category: Baran, M.C.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: Forouhar, F.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c37 OCA], [https://pdbe.org/3c37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c37 RCSB], [https://www.ebi.ac.uk/pdbsum/3c37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c37 ProSAT], [https://www.topsan.org/Proteins/NESGC/3c37 TOPSAN]</span></td></tr>
[[Category: Hunt, J.F.]]
</table>
[[Category: Kuzin, A.P.]]
== Function ==
[[Category: Liu, J.]]
[https://www.uniprot.org/uniprot/Q74D82_GEOSL Q74D82_GEOSL]  
[[Category: Maglaqui, M.]]
== Evolutionary Conservation ==
[[Category: Mao, L.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Montelione, G.T.]]
Check<jmol>
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
  <jmolCheckbox>
[[Category: Rost, B.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c3/3c37_consurf.spt"</scriptWhenChecked>
[[Category: Seetharaman, J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Tong, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Vorobiev, S.M.]]
  </jmolCheckbox>
[[Category: Wang, D.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c37 ConSurf].
[[Category: Xiao, R.]]
<div style="clear:both"></div>
[[Category: Yang, C.]]
__TOC__
[[Category: PEG]]
</StructureSection>
[[Category: ZN]]
[[Category: Geobacter sulfurreducens PCA]]
[[Category: gsr143a]]
[[Category: Large Structures]]
[[Category: hydrolase]]
[[Category: Acton TB]]
[[Category: m48 family]]
[[Category: Baran MC]]
[[Category: metalloprotease]]
[[Category: Chen Y]]
[[Category: nesg]]
[[Category: Forouhar F]]
[[Category: northeast structural genomics consortium]]
[[Category: Hunt JF]]
[[Category: peptidase]]
[[Category: Kuzin AP]]
[[Category: protease]]
[[Category: Liu J]]
[[Category: protein structure initiative]]
[[Category: Maglaqui M]]
[[Category: psi-2]]
[[Category: Mao L]]
[[Category: q74d82]]
[[Category: Montelione GT]]
[[Category: structural genomics]]
[[Category: Rost B]]
[[Category: x-ray]]
[[Category: Seetharaman J]]
[[Category: zinc]]
[[Category: Tong L]]
 
[[Category: Vorobiev SM]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 13 08:24:35 2008''
[[Category: Wang D]]
[[Category: Xiao R]]
Retrieved from "https://proteopedia.org/3c37"