3ck2: Difference between revisions

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New page: left|200px {{Structure |PDB= 3ck2 |SIZE=350|CAPTION= <scene name='initialview01'>3ck2</scene>, resolution 2.300Å |SITE= <scene name='pdbsite=AC1:Mn+Binding+Site+...
 
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[[Image:3ck2.jpg|left|200px]]


{{Structure
==Crystal structure of conserved uncharacterized protein (predicted phosphoesterase COG0622) from Streptococcus pneumoniae TIGR4==
|PDB= 3ck2 |SIZE=350|CAPTION= <scene name='initialview01'>3ck2</scene>, resolution 2.300&Aring;
<StructureSection load='3ck2' size='340' side='right'caption='[[3ck2]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Mn+Binding+Site+For+Residue+A+201'>AC1</scene>, <scene name='pdbsite=AC2:Mn+Binding+Site+For+Residue+A+202'>AC2</scene>, <scene name='pdbsite=AC3:Cl+Binding+Site+For+Residue+A+203'>AC3</scene>, <scene name='pdbsite=AC4:Cl+Binding+Site+For+Residue+A+204'>AC4</scene> and <scene name='pdbsite=AC5:Srt+Binding+Site+For+Residue+A+301'>AC5</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SRT:S,R+MESO-TARTARIC+ACID'>SRT</scene>
<table><tr><td colspan='2'>[[3ck2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CK2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CK2 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
|GENE= SP_1879 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=170187 Streptococcus pneumoniae TIGR4])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SRT:S,R+MESO-TARTARIC+ACID'>SRT</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0622 COG0622]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ck2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ck2 OCA], [https://pdbe.org/3ck2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ck2 RCSB], [https://www.ebi.ac.uk/pdbsum/3ck2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ck2 ProSAT], [https://www.topsan.org/Proteins/MCSG/3ck2 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ck2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ck2 OCA], [http://www.ebi.ac.uk/pdbsum/3ck2 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3ck2 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/A0A0H2URP5_STRPN A0A0H2URP5_STRPN]
 
== Evolutionary Conservation ==
'''Crystal structure of conserved uncharacterized protein (predicted phosphoesterase COG0622) from Streptococcus pneumoniae TIGR4'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ck/3ck2_consurf.spt"</scriptWhenChecked>
3CK2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tigr4 Streptococcus pneumoniae tigr4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CK2 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Streptococcus pneumoniae tigr4]]
  </jmolCheckbox>
[[Category: Abdullah, J.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ck2 ConSurf].
[[Category: Joachimiak, A.]]
<div style="clear:both"></div>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
__TOC__
[[Category: Nocek, B.]]
</StructureSection>
[[Category: Zhou, M.]]
[[Category: Large Structures]]
[[Category: hydrolase]]
[[Category: Streptococcus pneumoniae TIGR4]]
[[Category: mcsg]]
[[Category: Abdullah J]]
[[Category: midwest center for structural genomic]]
[[Category: Joachimiak A]]
[[Category: predicted phosphodiesterase]]
[[Category: Nocek B]]
[[Category: protein structure initiative]]
[[Category: Zhou M]]
[[Category: psi-2]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr  2 12:00:15 2008''

Latest revision as of 08:54, 30 October 2024

Crystal structure of conserved uncharacterized protein (predicted phosphoesterase COG0622) from Streptococcus pneumoniae TIGR4

3ck2, resolution 2.30Å

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