3d01: Difference between revisions

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{{Seed}}
[[Image:3d01.jpg|left|200px]]


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==Crystal structure of the protein Atu1372 with unknown function from Agrobacterium tumefaciens==
The line below this paragraph, containing "STRUCTURE_3d01", creates the "Structure Box" on the page.
<StructureSection load='3d01' size='340' side='right'caption='[[3d01]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3d01]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D01 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D01 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PG5:1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE'>PG5</scene></td></tr>
{{STRUCTURE_3d01|  PDB=3d01  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d01 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d01 OCA], [https://pdbe.org/3d01 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d01 RCSB], [https://www.ebi.ac.uk/pdbsum/3d01 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d01 ProSAT], [https://www.topsan.org/Proteins/MCSG/3d01 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the protein Atu1372 with unknown function from Agrobacterium tumefaciens===
== Function ==
 
[https://www.uniprot.org/uniprot/A9CJ63_AGRFC A9CJ63_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3D01 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D01 OCA].  
Check<jmol>
[[Category: Agrobacterium tumefaciens str. c58]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d01_consurf.spt"</scriptWhenChecked>
[[Category: Edwards, A M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Gu, J.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d01 ConSurf].
[[Category: Savchenko, A.]]
<div style="clear:both"></div>
[[Category: Xu, X.]]
__TOC__
[[Category: Zhang, R.]]
</StructureSection>
[[Category: Mcsg]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Midwest center for structural genomic]]
[[Category: Large Structures]]
[[Category: Protein structure initiative]]
[[Category: Edwards AM]]
[[Category: Protein with unknown function]]
[[Category: Gu J]]
[[Category: Psi]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Savchenko A]]
[[Category: Unknown function]]
[[Category: Xu X]]
 
[[Category: Zhang R]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul  3 11:31:42 2008''
Retrieved from "https://proteopedia.org/3d01"