3ef8: Difference between revisions

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{{Seed}}
[[Image:3ef8.png|left|200px]]


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==Crystal structure of Putative Scytalone Dehydratase (YP_496742.1) from NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 at 1.50 A resolution==
The line below this paragraph, containing "STRUCTURE_3ef8", creates the "Structure Box" on the page.
<StructureSection load='3ef8' size='340' side='right'caption='[[3ef8]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ef8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans_DSM_12444 Novosphingobium aromaticivorans DSM 12444]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EF8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
{{STRUCTURE_3ef8|  PDB=3ef8  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ef8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ef8 OCA], [https://pdbe.org/3ef8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ef8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ef8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ef8 ProSAT], [https://www.topsan.org/Proteins/JCSG/3ef8 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of Putative Scyalone Dehydratase (YP_496742.1) from NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 at 1.50 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/Q2G8B5_NOVAD Q2G8B5_NOVAD]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3EF8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans_dsm_12444 Novosphingobium aromaticivorans dsm 12444]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EF8 OCA].  
Check<jmol>
[[Category: Novosphingobium aromaticivorans dsm 12444]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ef/3ef8_consurf.spt"</scriptWhenChecked>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Jcsg]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joint center for structural genomic]]
  </jmolCheckbox>
[[Category: Lyase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ef8 ConSurf].
[[Category: Protein structure initiative]]
<div style="clear:both"></div>
[[Category: Psi-2]]
__TOC__
[[Category: Putative scyalone dehydratase]]
</StructureSection>
[[Category: Structural genomic]]
[[Category: Large Structures]]
[[Category: Unknown function]]
[[Category: Novosphingobium aromaticivorans DSM 12444]]
[[Category: Yp_496742 1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Oct 28 15:05:22 2008''
Retrieved from "https://proteopedia.org/3ef8"