3h02: Difference between revisions

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[[Image:3h02.jpg|left|200px]]


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==2.15 Angstrom Resolution Crystal Structure of Naphthoate Synthase from Salmonella typhimurium.==
The line below this paragraph, containing "STRUCTURE_3h02", creates the "Structure Box" on the page.
<StructureSection load='3h02' size='340' side='right'caption='[[3h02]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3h02]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H02 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H02 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3h02|  PDB=3h02  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h02 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h02 OCA], [https://pdbe.org/3h02 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h02 RCSB], [https://www.ebi.ac.uk/pdbsum/3h02 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h02 ProSAT], [https://www.topsan.org/Proteins/CSGID/3h02 TOPSAN]</span></td></tr>
 
</table>
===2.15 Angstrom Resolution Crystal Structure of Naphthoate Synthase from Salmonella typhimurium.===
== Function ==
 
[https://www.uniprot.org/uniprot/MENB_SALTY MENB_SALTY] Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).[HAMAP-Rule:MF_01934]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3H02 is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H02 OCA].  
Check<jmol>
[[Category: Naphthoate synthase]]
  <jmolCheckbox>
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h0/3h02_consurf.spt"</scriptWhenChecked>
[[Category: Anderson, W F.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Minasov, G.]]
  </jmolCheckbox>
[[Category: Onopriyenko, O.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h02 ConSurf].
[[Category: Savchenko, A.]]
<div style="clear:both"></div>
[[Category: Scott, P.]]
__TOC__
[[Category: Skarina, T.]]
</StructureSection>
[[Category: Wawrzak, Z.]]
[[Category: Large Structures]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Csgid]]
[[Category: Anderson WF]]
[[Category: Idp00995]]
[[Category: Minasov G]]
[[Category: Lyase]]
[[Category: Onopriyenko O]]
[[Category: Naphthoate synthase]]
[[Category: Peterson SN]]
[[Category: Structural genomic]]
[[Category: Savchenko A]]
 
[[Category: Skarina T]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 22 11:46:35 2009''
[[Category: Wawrzak Z]]