3ig2: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{STRUCTURE_3ig2|  PDB=3ig2  |  SCENE=  }}
===The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A===


==About this Structure==
==The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A==
[[3ig2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IG2 OCA].  
<StructureSection load='3ig2' size='340' side='right'caption='[[3ig2]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3ig2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IG2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IG2 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ig2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ig2 OCA], [https://pdbe.org/3ig2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ig2 RCSB], [https://www.ebi.ac.uk/pdbsum/3ig2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ig2 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SYFB_BACFN SYFB_BACFN]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ig/3ig2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ig2 ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
__TOC__
</StructureSection>
[[Category: Bacteroides fragilis]]
[[Category: Bacteroides fragilis]]
[[Category: Phenylalanine--tRNA ligase]]
[[Category: Large Structures]]
[[Category: Hendricks, R.]]
[[Category: Hendricks R]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: Keigher, L.]]
[[Category: Keigher L]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Sather A]]
[[Category: Sather, A.]]
[[Category: Stein AJ]]
[[Category: Stein, A J.]]
[[Category: Aminoacyl-trna synthetase]]
[[Category: Atp-binding]]
[[Category: Bacteroide]]
[[Category: Fragili]]
[[Category: Ligase]]
[[Category: Magnesium]]
[[Category: Mcsg]]
[[Category: Metal-binding]]
[[Category: Midwest center for structural genomic]]
[[Category: Nucleotide-binding]]
[[Category: Phenylalanyl-trna]]
[[Category: Pher]]
[[Category: Protein biosynthesis]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Rna-binding]]
[[Category: Structural genomic]]
[[Category: Synthetase]]
[[Category: Trna-binding]]
Retrieved from "https://proteopedia.org/3ig2"