PDB REDO: Difference between revisions

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A databank with updated and optimised macromolecular X-ray diffraction structure models. [https://pdb-redo.eu/ pdb-redo.eu]

[[Image:PDB REDO.png|right]]

=== Why to ''redo'' PDB? ===

=== Why ''redo'' PDB files? ===

The goal of PDB_REDO is to provide optimised structure models for a wide

range of PDB users (biologist, (bio)chemist, drug designers, teachers

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''PDB_REDO: automated re-refinement of X-ray structure models in the PDB'', Joosten RP, Salzemann J, Bloch V, Stockinger H, Berglund AC, Blanchet C, Bongcam-Rudloff E, Combet C, Da Costa AL, Deleage G, Diarena M, Fabbretti R, Fettahi G, Flegel V, Gisel A, Kasam V, Kervinen T, Korpelainen E, Mattila K, Pagni M, Reichstadt M, Breton V, Tickle IJ, Vriend G (2009) JOURNAL OF APPLIED CRYSTALLOGRAPHY 42 : 376-384

===How To ReDo===

# Go to [https://pdb-redo.eu/ pdb-redo.eu].

# Enter the [[PDB ID]] of a published structure.

# Download the re-refined and rebuilt PDB file.

# [http://firstglance.jmol.org/where.htm#uploading Upload] it to [http://firstglance.jmol.org FirstGlance in Jmol] or open it in [[Molecular modeling and visualization software|another viewer]].

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@@ Line 2: / Line 2: @@
 A databank with updated and optimised macromolecular X-ray diffraction structure models. [https://pdb-redo.eu/ pdb-redo.eu]
 [[Image:PDB REDO.png|right]]
-=== Why to ''redo'' PDB? ===
+=== Why ''redo'' PDB files? ===
 The goal of PDB_REDO is to provide optimised structure models for a wide
 range of PDB users (biologist, (bio)chemist, drug designers, teachers
@@ Line 22: / Line 22: @@
 ''PDB_REDO: automated re-refinement of X-ray structure models in the PDB'', Joosten RP, Salzemann J, Bloch V, Stockinger H, Berglund AC, Blanchet C, Bongcam-Rudloff E, Combet C, Da Costa AL, Deleage G, Diarena M, Fabbretti R, Fettahi G, Flegel V, Gisel A, Kasam V, Kervinen T, Korpelainen E, Mattila K, Pagni M, Reichstadt M, Breton V, Tickle IJ, Vriend G (2009) JOURNAL OF APPLIED CRYSTALLOGRAPHY 42 : 376-384
+===How To ReDo===
+# Go to [https://pdb-redo.eu/ pdb-redo.eu].
+# Enter the [[PDB ID]] of a published structure.
+# Download the re-refined and rebuilt PDB file.
+# [http://firstglance.jmol.org/where.htm#uploading Upload] it to [http://firstglance.jmol.org FirstGlance in Jmol] or open it in [[Molecular modeling and visualization software|another viewer]].