2kky: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Solution Structure of C-terminal domain of oxidized NleG2-3 (residue 90-191) from Pathogenic E. coli O157:H7. Northeast Structural Genomics Consortium and Midwest Center for Structural Genomics target ET109A==
==Solution Structure of C-terminal domain of oxidized NleG2-3 (residue 90-191) from Pathogenic E. coli O157:H7. Northeast Structural Genomics Consortium and Midwest Center for Structural Genomics target ET109A==
<StructureSection load='2kky' size='340' side='right' caption='[[2kky]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2kky' size='340' side='right'caption='[[2kky]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2kky]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Eco57 Eco57]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KKY FirstGlance]. <br>
<table><tr><td colspan='2'>[[2kky]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KKY FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2kkx|2kkx]]</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ECs2156, Z2149 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83334 ECO57])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kky OCA], [https://pdbe.org/2kky PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kky RCSB], [https://www.ebi.ac.uk/pdbsum/2kky PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kky ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kky OCA], [http://pdbe.org/2kky PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kky RCSB], [http://www.ebi.ac.uk/pdbsum/2kky PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8X509_ECO57 Q8X509_ECO57]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/2kky_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/2kky_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kky ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 30: Line 32:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Eco57]]
[[Category: Escherichia coli O157:H7]]
[[Category: Arrowsmith, C H]]
[[Category: Large Structures]]
[[Category: Claude, M]]
[[Category: Arrowsmith CH]]
[[Category: Edwards, A]]
[[Category: Claude M]]
[[Category: Fares, C]]
[[Category: Edwards A]]
[[Category: Joachimiak, A]]
[[Category: Fares C]]
[[Category: Lemak, A]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Lemak A]]
[[Category: Montelione, G T]]
[[Category: Montelione GT]]
[[Category: OCSP, Ontario Centre for Structural Proteomics]]
[[Category: Savchenko A]]
[[Category: Savchenko, A]]
[[Category: Semest A]]
[[Category: Semest, A]]
[[Category: Singer A]]
[[Category: Singer, A]]
[[Category: Wu B]]
[[Category: Wu, B]]
[[Category: Yee A]]
[[Category: Yee, A]]
[[Category: Mcsg]]
[[Category: Methods development]]
[[Category: Nesg]]
[[Category: Ocsp]]
[[Category: Ontario centre for structural proteomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: U-box domain]]
[[Category: Unknown function]]
Retrieved from "https://proteopedia.org/2kky"