2vhr: Difference between revisions

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{{Seed}}
[[Image:2vhr.jpg|left|200px]]


<!--
==Atomic resolution (0.95A) structure of purified thaumatin I grown in sodium L-tartrate at 4 C==
The line below this paragraph, containing "STRUCTURE_2vhr", creates the "Structure Box" on the page.
<StructureSection load='2vhr' size='340' side='right'caption='[[2vhr]], [[Resolution|resolution]] 0.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2vhr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VHR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VHR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.95&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
{{STRUCTURE_2vhr|  PDB=2vhr  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vhr OCA], [https://pdbe.org/2vhr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vhr RCSB], [https://www.ebi.ac.uk/pdbsum/2vhr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vhr ProSAT]</span></td></tr>
 
</table>
===ATOMIC RESOLUTION (0.95A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM L-TARTRATE AT 4 C===
== Function ==
 
[https://www.uniprot.org/uniprot/THM1_THADA THM1_THADA] Taste-modifying protein; intensely sweet-tasting. It is 100000 times sweeter than sucrose on a molar basis.
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2VHR is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VHR OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vh/2vhr_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vhr ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thaumatococcus daniellii]]
[[Category: Thaumatococcus daniellii]]
[[Category: Asherie, N.]]
[[Category: Asherie N]]
[[Category: Ginsberg, C.]]
[[Category: Ginsberg C]]
[[Category: Jakoncic, J.]]
[[Category: Jakoncic J]]
[[Category: Chirality]]
[[Category: Crystallization]]
[[Category: Kinetics of crystallization]]
[[Category: L-tartaric acid]]
[[Category: Microbatch]]
[[Category: Plant protein]]
[[Category: Purified protein]]
[[Category: Sweet protein]]
[[Category: Temperature]]
[[Category: Thaumatin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 12:36:16 2009''
Retrieved from "https://proteopedia.org/2vhr"