3a8s: Difference between revisions

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{{Seed}}
[[Image:3a8s.jpg|left|200px]]


<!--
==Crystal structure analysis of the fluorescent protein KillerRed==
The line below this paragraph, containing "STRUCTURE_3a8s", creates the "Structure Box" on the page.
<StructureSection load='3a8s' size='340' side='right'caption='[[3a8s]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3a8s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Anthomedusae_sp._DC-2005 Anthomedusae sp. DC-2005]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A8S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A8S FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CRQ:[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC+ACID'>CRQ</scene></td></tr>
{{STRUCTURE_3a8s|  PDB=3a8s  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a8s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a8s OCA], [https://pdbe.org/3a8s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a8s RCSB], [https://www.ebi.ac.uk/pdbsum/3a8s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a8s ProSAT]</span></td></tr>
 
</table>
===Crystal structure analysis of the fluorescent protein KillerRed===
== Function ==
 
[https://www.uniprot.org/uniprot/Q2TCH5_9CNID Q2TCH5_9CNID]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3A8S is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Anthomedusae Anthomedusae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A8S OCA].  
Check<jmol>
[[Category: Anthomedusae]]
  <jmolCheckbox>
[[Category: Kitago, Y.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a8/3a8s_consurf.spt"</scriptWhenChecked>
[[Category: Matsuda, T.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Nagai, T.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Sakai, N.]]
  </jmolCheckbox>
[[Category: Takemoto, K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a8s ConSurf].
[[Category: Fluorescent protein]]
<div style="clear:both"></div>
[[Category: Phototoxicity]]
__TOC__
 
</StructureSection>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 14 09:48:49 2010''
[[Category: Anthomedusae sp. DC-2005]]
[[Category: Large Structures]]
[[Category: Kitago Y]]
[[Category: Matsuda T]]
[[Category: Nagai T]]
[[Category: Sakai N]]
[[Category: Takemoto K]]

Latest revision as of 01:35, 21 November 2024

Crystal structure analysis of the fluorescent protein KillerRed

3a8s, resolution 2.90Å

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