3a8s: Difference between revisions

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[[Image:3a8s.png|left|200px]]


{{STRUCTURE_3a8s|  PDB=3a8s  |  SCENE=  }}
==Crystal structure analysis of the fluorescent protein KillerRed==
 
<StructureSection load='3a8s' size='340' side='right'caption='[[3a8s]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
===Crystal structure analysis of the fluorescent protein KillerRed===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3a8s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Anthomedusae_sp._DC-2005 Anthomedusae sp. DC-2005]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A8S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A8S FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CRQ:[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC+ACID'>CRQ</scene></td></tr>
[[3a8s]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anthomedusae Anthomedusae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A8S OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a8s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a8s OCA], [https://pdbe.org/3a8s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a8s RCSB], [https://www.ebi.ac.uk/pdbsum/3a8s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a8s ProSAT]</span></td></tr>
[[Category: Anthomedusae]]
</table>
[[Category: Kitago, Y.]]
== Function ==
[[Category: Matsuda, T.]]
[https://www.uniprot.org/uniprot/Q2TCH5_9CNID Q2TCH5_9CNID]  
[[Category: Nagai, T.]]
== Evolutionary Conservation ==
[[Category: Sakai, N.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Takemoto, K.]]
Check<jmol>
[[Category: Fluorescent protein]]
  <jmolCheckbox>
[[Category: Phototoxicity]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a8/3a8s_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a8s ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Anthomedusae sp. DC-2005]]
[[Category: Large Structures]]
[[Category: Kitago Y]]
[[Category: Matsuda T]]
[[Category: Nagai T]]
[[Category: Sakai N]]
[[Category: Takemoto K]]
Retrieved from "https://proteopedia.org/3a8s"