3jyf: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
New page: {{Seed}} left|200px <!-- The line below this paragraph, containing "STRUCTURE_3jyf", creates the "Structure Box" on the page. You may change the PDB parameter (which se...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3jyf.jpg|left|200px]]


<!--
==The crystal structure of a 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor protein from Klebsiella pneumoniae subsp. pneumoniae MGH 78578==
The line below this paragraph, containing "STRUCTURE_3jyf", creates the "Structure Box" on the page.
<StructureSection load='3jyf' size='340' side='right'caption='[[3jyf]], [[Resolution|resolution]] 2.43&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3jyf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 Klebsiella pneumoniae subsp. pneumoniae MGH 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JYF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.43&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAM:TRIS(HYDROXYETHYL)AMINOMETHANE'>TAM</scene></td></tr>
{{STRUCTURE_3jyf| PDB=3jyf |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jyf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jyf OCA], [https://pdbe.org/3jyf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jyf RCSB], [https://www.ebi.ac.uk/pdbsum/3jyf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jyf ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A6THC4_KLEP7 A6THC4_KLEP7]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jy/3jyf_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jyf ConSurf].
<div style="clear:both"></div>


===The crystal structure of a 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor protein from Klebsiella pneumoniae subsp. pneumoniae MGH 78578===
==See Also==
 
*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3JYF is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_mgh_78578 Klebsiella pneumoniae subsp. pneumoniae mgh 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYF OCA].
[[Category: Klebsiella pneumoniae subsp. pneumoniae MGH 78578]]
[[Category: Klebsiella pneumoniae subsp. pneumoniae mgh 78578]]
[[Category: Large Structures]]
[[Category: Cobb, G.]]
[[Category: Cobb G]]
[[Category: Fan, Y.]]
[[Category: Fan Y]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Volkart L]]
[[Category: Volkart, L.]]
[[Category: 3-cyclic nucleotide 2-phosphodiesterase]]
[[Category: 3-nucleotidase]]
[[Category: Apc63187 2]]
[[Category: Bifunctional periplasmic precursor protein]]
[[Category: Hydrolase]]
[[Category: Klebsiella pneumoniae subsp. pneumoniae mgh 78578]]
[[Category: Mcsg]]
[[Category: Metal-binding]]
[[Category: Midwest center for structural genomic]]
[[Category: Nucleotide-binding]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:33:59 2009''

Latest revision as of 01:59, 21 November 2024

The crystal structure of a 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor protein from Klebsiella pneumoniae subsp. pneumoniae MGH 78578

3jyf, resolution 2.43Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=3jyf&oldid=4272158"