3l0r: Difference between revisions
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==Crystal Structure of Salivary Cystatin from the Soft Tick Ornithodoros moubata== | ==Crystal Structure of Salivary Cystatin from the Soft Tick Ornithodoros moubata== | ||
<StructureSection load='3l0r' size='340' side='right' caption='[[3l0r]], [[Resolution|resolution]] 2.45Å' scene=''> | <StructureSection load='3l0r' size='340' side='right'caption='[[3l0r]], [[Resolution|resolution]] 2.45Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3l0r]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3l0r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ornithodoros_moubata Ornithodoros moubata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L0R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L0R FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l0r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l0r OCA], [https://pdbe.org/3l0r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l0r RCSB], [https://www.ebi.ac.uk/pdbsum/3l0r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l0r ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/CYS2_ORNMO CYS2_ORNMO] Inhibitor of cysteine proteinases with broad specificity for mammalian cathepsins, including endopeptidases (cathepsins L and S) and exopeptidases (cathepsins B, C and H) (PubMed:17132111, PubMed:20545626). Also inhibits endogenous cathepsin B-like and cathepsin C-like proteinases (PubMed:17132111). Does not inhibit human legumain (PubMed:20545626). May mimic specific host-derived cystatin(s) to interfere with its/their function in controlling cathepsin-mediated proteolysis (PubMed:20545626). Affects the function of antigen-presenting mouse dendritic cells by reducing the production of the pro-inflammatory cytokines TNF and interleukin-12, and proliferation of antigen-specific CD4+ T-cells, suggesting it may suppress the host adaptive immune response (PubMed:20545626). It is noteworthy that immunization of mice with this protein reduces O.moubata survival in infestation experiments (PubMed:20545626).<ref>PMID:17132111</ref> <ref>PMID:20545626</ref> | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l0/3l0r_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l0/3l0r_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Andersen | [[Category: Ornithodoros moubata]] | ||
[[Category: Brynda | [[Category: Andersen JF]] | ||
[[Category: Kovarova | [[Category: Brynda J]] | ||
[[Category: Mares | [[Category: Kovarova Z]] | ||
[[Category: Rezacova | [[Category: Mares M]] | ||
[[Category: Salat | [[Category: Rezacova P]] | ||
[[Category: Salat J]] | |||
Latest revision as of 02:03, 21 November 2024
Crystal Structure of Salivary Cystatin from the Soft Tick Ornithodoros moubata
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