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[[Image:2dr1.jpg|left|200px]]


{{Structure
==Crystal structure of the PH1308 protein from Pyrococcus horikoshii OT3==
|PDB= 2dr1 |SIZE=350|CAPTION= <scene name='initialview01'>2dr1</scene>, resolution 1.90&Aring;
<StructureSection load='2dr1' size='340' side='right'caption='[[2dr1]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene> and <scene name='pdbligand=PLP:PYRIDOXAL-5&#39;-PHOSPHATE'>PLP</scene>
<table><tr><td colspan='2'>[[2dr1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DR1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DR1 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
|GENE=
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dr1 OCA], [https://pdbe.org/2dr1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dr1 RCSB], [https://www.ebi.ac.uk/pdbsum/2dr1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dr1 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dr1 TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of the PH1308 protein from Pyrococcus horikoshii OT3'''
== Function ==
 
[https://www.uniprot.org/uniprot/O59033_PYRHO O59033_PYRHO]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2DR1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DR1 OCA].
Check<jmol>
[[Category: Pyrococcus horikoshii]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/2dr1_consurf.spt"</scriptWhenChecked>
[[Category: Kunishima, N.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Mizutani, H.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
  </jmolCheckbox>
[[Category: CL]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dr1 ConSurf].
[[Category: NA]]
<div style="clear:both"></div>
[[Category: PLP]]
__TOC__
[[Category: aminotransferase]]
</StructureSection>
[[Category: national project on protein structural and functional analyse]]
[[Category: Large Structures]]
[[Category: nppsfa]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: plp]]
[[Category: Kunishima N]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Mizutani H]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 14:57:13 2008''

Latest revision as of 22:21, 26 March 2025

Crystal structure of the PH1308 protein from Pyrococcus horikoshii OT3

2dr1, resolution 1.90Å

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