User:Wayne Decatur: Difference between revisions
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Protopedia recognizes <br> and <p></p> but most times <p></p> not necessary. | Protopedia recognizes <br> and <p></p> but most times <p></p> not necessary. | ||
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Research Associate in the Department of Biochemistry and Molecular Biology at the SUNY Upstate Medical University.<br> | |||
'''Member of the [[Proteopedia:About#The Proteopedia Team|Proteopedia Editorial Board]]'''. | '''Member of the [[Proteopedia:About#The Proteopedia Team|Proteopedia Editorial Board]]'''. | ||
Project Jupyter Distinguished Contributor | |||
Member of the Bioinformatics Virtual Coordination Network Instructor Consortium | |||
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small RNAs and their associated ribonucleoprotein complexes; the Ribosome; RNA modification; catalytic RNAs; homing endonucleases, group I introns; leucine-rich repeats; hormones and their receptors. | small RNAs and their associated ribonucleoprotein complexes; the Ribosome; RNA modification; catalytic RNAs; homing endonucleases, group I introns; leucine-rich repeats; hormones and their receptors. | ||
</p> | </p> | ||
<!--[http://people.umass.edu/wdecatur/index.html Wayne's site on the web] NO LONGER WORKS--> | <!--[http://people.umass.edu/wdecatur/index.html Wayne's site on the web] NO LONGER WORKS--> | ||
[http://www.unh.edu/biochemistry/sower/post-doc-wayne-decatur.html Wayne's page on the Sower Lab site] | <!--[http://www.unh.edu/biochemistry/sower/post-doc-wayne-decatur.html Wayne's page on the Sower Lab site]--> | ||
[http://fomightez.github.io/ Wayne at Github] | [http://fomightez.github.io/ Wayne at Github] | ||
[ | [https://pubmed.ncbi.nlm.nih.gov/?term=decatur-w Wayne's publications listed at the the U.S. National Library of Medicine's PubMed database] | ||
Past affiliations:<br> | |||
*Cornell University | |||
*University of Massachusetts at Amherst | |||
*University of New Hampshire | |||
email: {{Template:Decatur_email}} | email: {{Template:Decatur_email}} | ||
==Some Proteopedia Pages to Which I've Contributed== | ==Some Proteopedia Pages to Which I've Contributed== | ||
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*[[Green Fluorescent Protein]] | *[[Green Fluorescent Protein]] | ||
*[[Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa|DEAD-box helicase protein Vasa]] | *[[Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa|DEAD-box helicase protein Vasa]] | ||
*[[3dmq|Swi2/Snf2 protein RapA]] | <!--*[[3dmq|Swi2/Snf2 protein RapA]] I FEAR EVEN HISTORY WIPED OUT WHEN REPLACED PDB ID CONTENT WITH OCA?!?!! ---> | ||
*[[2eyq|Mfd (TRCF, transcription-repair coupling factor)]] | <!--*[[2eyq|Mfd (TRCF, transcription-repair coupling factor)]] I FEAR EVEN HISTORY WIPED OUT WHEN REPLACED PDB ID CONTENT WITH OCA?!?!! ---> | ||
*[[3fpn|UvrA-UvrB interaction domains complex]] | <!--*[[3fpn|UvrA-UvrB interaction domains complex]] I FEAR EVEN HISTORY WIPED OUT WHEN REPLACED PDB ID CONTENT WITH OCA?!?!! ---> | ||
*[[3ews|DExD/H-box RNA-dependent ATPase DDX19 in the open]] and [[3g0h|closed]] cleft conformation | <!--*[[3ews|DExD/H-box RNA-dependent ATPase DDX19 in the open]] and [[3g0h|closed]] cleft conformation I FEAR EVEN HISTORY WIPED OUT WHEN REPLACED PDB ID CONTENT WITH OCA?!?!! ---> | ||
*[[3gfp|C-terminal domain of the DExD/H-box RNA-dependent ATPase Dbp5]] | <!--*[[3gfp|C-terminal domain of the DExD/H-box RNA-dependent ATPase Dbp5]]| I FEAR EVEN HISTORY WIPED OUT WHEN REPLACED PDB ID CONTENT WITH OCA?!?!! ---> | ||
*[[RecG Bound to Three-Way DNA Junction|RecG in complex with a synthetic three-way DNA junction resembling a stalled replication fork]] | *[[RecG Bound to Three-Way DNA Junction|RecG in complex with a synthetic three-way DNA junction resembling a stalled replication fork]] | ||
*[[LepA|Escherichia coli LepA, the ribosomal back translocase]] | *[[LepA|Escherichia coli LepA, the ribosomal back translocase]] | ||
*[[Pore forming toxin, α-hemolysin|The Pore Forming Toxin, α-hemolysin]] | *[[Pore forming toxin, α-hemolysin|The Pore Forming Toxin, α-hemolysin]] | ||
*[[3lqq|CED-4 Apoptosome]] | <!--*[[3lqq|CED-4 Apoptosome]] SEEMS EVEN HISTORY WIPED OUT WHEN REPLACED PDB ID CONTENT WITH OCA?!?!! I DID FInd the FILE FOR THE MORPH FOR THIS PAGE LISTED IN MY USER CONTRIBUTIONS--> | ||
*[[Glutamate receptor (GluA2)|The Glutamate Receptor (GluA2)]] | *[[Glutamate receptor (GluA2)|The Glutamate Receptor (GluA2)]] | ||
*[[Luciferase]] | *[[Luciferase]] | ||
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*[[G protein-coupled receptor]] | *[[G protein-coupled receptor]] | ||
*[[Forkhead box protein M1]] | *[[Forkhead box protein M1]] | ||
<!--*[[2beg|amyloid-beta fibrils]]--> | <!--*[[2beg|amyloid-beta fibrils]] I FEAR EVEN HISTORY WIPED OUT WHEN REPLACED PDB ID CONTENT WITH OCA?!?!! WOULD NEED TO MOVE TO BETTER NAMED PAGE ---> | ||
*[[Kink-turn motif]] | *[[Kink-turn motif]] | ||
*[[Pseudouridine]] | |||
*[[Zika virus subgenomic flaviviral RNA]] | |||
*[[RNase P]] | |||
*[[yeast RNase P]] | |||
*[[Cubic Diamond Lattice Metal-Organic Framework]] | |||
*[[Catalytic Molybdenum Metal-Organic Framework]] | |||
===Topic Pages - Structural Bioinformatics=== | ===Topic Pages - Structural Bioinformatics=== | ||
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*[[Isoelectric point]] | *[[Isoelectric point]] | ||
*[[Standard Residues]] and [[Non-Standard Residues]] | *[[Standard Residues]] and [[Non-Standard Residues]] | ||
*[[Reentrant loops]] | |||
*[[Web servers for convenient generation of publication-quality figures for molecular views]] | |||
===Topic Pages - Education=== | ===Topic Pages - Education=== | ||
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* [[Proteopedia:Facebook]] | * [[Proteopedia:Facebook]] | ||
* [[Proteopedia:Twitter]] | * [[Proteopedia:Twitter]] | ||
* [[Proteopedia:Macros]] | |||
* [[Proteopedia:DIY:Macros]] | |||
* [[Proteopedia:Cookbook]] | |||
* [[Combine Proteopedia scenes with inline JSmol scripting]] | |||
* [[Proteopedia:DIY:Templates]] | |||
* [[Jmol]] | * [[Jmol]] | ||
* [[DRuMS]] | * [[DRuMS]] | ||
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==Workshops, Lectures, and Seminars== | ==Workshops, Lectures, and Seminars== | ||
*[[User:Wayne Decatur/ GS647-021 Structuring against Coronavirus 2020| UPSTATE MEDICAL GS647-021 Nanocourse: Structuring against Coronavirus (April-May) 2020]] | |||
*[[User:Wayne Decatur/UNH BCHEM833 Structural Analysis Workshop Session Fall 2012|UNH BIOCHEM833 Structural Analysis for Non-Structural Biologists Workshop Session Fall Semester (November 8th) 2012]] | *[[User:Wayne Decatur/UNH BCHEM833 Structural Analysis Workshop Session Fall 2012|UNH BIOCHEM833 Structural Analysis for Non-Structural Biologists Workshop Session Fall Semester (November 8th) 2012]] | ||
*[[User:Wayne Decatur/UNH BCHEM833 Structural Proteomics Introductory Lecture Fall 2012|UNH BIOCHEM833 Structural Analysis for Non-Structural Biologists Introductory Lecture Fall Semester (October 25th) 2012]] | *[[User:Wayne Decatur/UNH BCHEM833 Structural Proteomics Introductory Lecture Fall 2012|UNH BIOCHEM833 Structural Analysis for Non-Structural Biologists Introductory Lecture Fall Semester (October 25th) 2012]] | ||
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*[[Sandbox1rpu]] working out configuration&isosurfaces&dots problems | *[[Sandbox1rpu]] working out configuration&isosurfaces&dots problems | ||
*[[Sandbox2hvy]] test for dots in another file | *[[Sandbox2hvy]] test for dots in another file | ||
* [[Sandbox CsrA]] | * [[Sandbox CsrA]] | ||
* [[Sandbox TestMultiSurface]] | * [[Sandbox TestMultiSurface]] | ||
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*[[User:Wayne Decatur/Alter Disulfide Bonds in a Structure ]] | *[[User:Wayne Decatur/Alter Disulfide Bonds in a Structure ]] | ||
*[[User:Wayne Decatur/4ay9 pymol]] | *[[User:Wayne Decatur/4ay9 pymol]] | ||
*[[User:Wayne Decatur/Hsp90 Structures with client proteins]] | |||
*[[User:Wayne Decatur/Gal 4]] | *[[User:Wayne Decatur/Gal 4]] | ||
*[[User:Wayne Decatur/mof_dev]] | |||
*[[User:Wayne Decatur/Homology Modeling]] | *[[User:Wayne Decatur/Homology Modeling]] | ||
*[[User:Wayne Decatur/Sequence analysis tools]] | *[[User:Wayne Decatur/Sequence analysis tools]] | ||
