1ith: Difference between revisions

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<StructureSection load='1ith' size='340' side='right'caption='[[1ith]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='1ith' size='340' side='right'caption='[[1ith]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1ith]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Innkeeper_worm Innkeeper worm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ITH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1ITH FirstGlance]. <br>
<table><tr><td colspan='2'>[[1ith]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Urechis_caupo Urechis caupo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ITH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ITH FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CDNA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6431 Innkeeper worm])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1ith FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ith OCA], [http://pdbe.org/1ith PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ith RCSB], [http://www.ebi.ac.uk/pdbsum/1ith PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ith ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ith FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ith OCA], [https://pdbe.org/1ith PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ith RCSB], [https://www.ebi.ac.uk/pdbsum/1ith PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ith ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/HBF1_URECA HBF1_URECA]] Hemoglobin F-I appears to function in storage, rather than transport of oxygen.  
[https://www.uniprot.org/uniprot/HBF1_URECA HBF1_URECA] Hemoglobin F-I appears to function in storage, rather than transport of oxygen.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/it/1ith_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/it/1ith_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Innkeeper worm]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Ernst, S R]]
[[Category: Urechis caupo]]
[[Category: Hackert, M]]
[[Category: Ernst SR]]
[[Category: Hendrickson, W A]]
[[Category: Hackert M]]
[[Category: Kolatkar, P]]
[[Category: Hendrickson WA]]
[[Category: Merritt, E A]]
[[Category: Kolatkar P]]
[[Category: Ogata, C M]]
[[Category: Merritt EA]]
[[Category: Phizackerley, R P]]
[[Category: Ogata CM]]
[[Category: Oxygen transport]]
[[Category: Phizackerley RP]]

Latest revision as of 06:12, 13 August 2026

STRUCTURE DETERMINATION AND REFINEMENT OF HOMOTETRAMERIC HEMOGLOBIN FROM URECHIS CAUPO AT 2.5 ANGSTROMS RESOLUTION

1ith, resolution 2.50Å

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