9pb8: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 9pb8 is ~~ON HOLD~~

==TBP/TFIIE/DNA of PIC-Med-SWI/SNF==

~~Authors~~:

== Structural highlights ==

<table><tr><td colspan='2'>[[9pb8]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9PB8 OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=9PB8 FirstGlance].

~~Description~~:

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.2Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=9pb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9pb8 OCA], [https://pdbe.org/9pb8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9pb8 RCSB], [https://www.ebi.ac.uk/pdbsum/9pb8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9pb8 ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/TBP_YEAST TBP_YEAST] General transcription factor that functions at the core of the DNA-binding general transcription factor complex TFIID. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modification (histone acetylation by TAF1), facilitation of DNA opening and initiation of transcription.<ref>PMID:9618449</ref> <ref>PMID:12138208</ref> <ref>PMID:12516863</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Large Structures]]

[[Category: Saccharomyces cerevisiae]]

[[Category: Chen D-H]]

[[Category: Nagai S]]

[[Category: Yang C]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 9pb8 is ON HOLD
+==TBP/TFIIE/DNA of PIC-Med-SWI/SNF==
+<StructureSection load='9pb8' size='340' side='right'caption='[[9pb8]], [[Resolution|resolution]] 4.20&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[9pb8]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9PB8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9PB8 FirstGlance]. <br>
-Description:
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.2&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9pb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9pb8 OCA], [https://pdbe.org/9pb8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9pb8 RCSB], [https://www.ebi.ac.uk/pdbsum/9pb8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9pb8 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/TBP_YEAST TBP_YEAST] General transcription factor that functions at the core of the DNA-binding general transcription factor complex TFIID. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modification (histone acetylation by TAF1), facilitation of DNA opening and initiation of transcription.<ref>PMID:9618449</ref> <ref>PMID:12138208</ref> <ref>PMID:12516863</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Saccharomyces cerevisiae]]
+[[Category: Chen D-H]]
+[[Category: Nagai S]]
+[[Category: Yang C]]