2kob: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
New page: {{Seed}} left|200px <!-- The line below this paragraph, containing "STRUCTURE_2kob", creates the "Structure Box" on the page. You may change the PDB parameter (which se...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2kob.jpg|left|200px]]


<!--
==Solution NMR structure of CLOLEP_01837 (fragment 61-160) from Clostridium leptum. Northeast Structural Genomics Consortium Target QlR8A==
The line below this paragraph, containing "STRUCTURE_2kob", creates the "Structure Box" on the page.
<StructureSection load='2kob' size='340' side='right'caption='[[2kob]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2kob]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_leptum_DSM_753 Clostridium leptum DSM 753]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KOB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KOB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kob FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kob OCA], [https://pdbe.org/2kob PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kob RCSB], [https://www.ebi.ac.uk/pdbsum/2kob PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kob ProSAT]</span></td></tr>
{{STRUCTURE_2kob|  PDB=2kob  |  SCENE=  }}
</table>
 
== Function ==
===Solution NMR structure of CLOLEP_01837 (fragment 61-160) from Clostridium leptum. Northeast Structural Genomics Consortium Target QlR8A===
[https://www.uniprot.org/uniprot/A7VTE5_9FIRM A7VTE5_9FIRM]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2KOB is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_leptum_dsm_753 Clostridium leptum dsm 753]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KOB OCA].  
  <jmolCheckbox>
[[Category: Clostridium leptum dsm 753]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ko/2kob_consurf.spt"</scriptWhenChecked>
[[Category: Acton, T B.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Ciccosanti, C.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Everett, J K.]]
  </jmolCheckbox>
[[Category: Jiang, M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kob ConSurf].
[[Category: Kennedy, M A.]]
<div style="clear:both"></div>
[[Category: Lee, D.]]
__TOC__
[[Category: Montelione, G T.]]
</StructureSection>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Large Structures]]
[[Category: Nair, R.]]
[[Category: Acton TB]]
[[Category: Ramelot, T A.]]
[[Category: Ciccosanti C]]
[[Category: Rost, B.]]
[[Category: Everett JK]]
[[Category: Xiao, R.]]
[[Category: Jiang M]]
[[Category: Alpha beta]]
[[Category: Kennedy MA]]
[[Category: Nesg]]
[[Category: Lee D]]
[[Category: Northeast structural genomics consortium]]
[[Category: Montelione GT]]
[[Category: Protein structure initiative]]
[[Category: Nair R]]
[[Category: Psi-2]]
[[Category: Ramelot TA]]
[[Category: Structural genomic]]
[[Category: Rost B]]
[[Category: Unknown function]]
[[Category: Xiao R]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:23:15 2009''
Retrieved from "https://proteopedia.org/2kob"