3ep1: Difference between revisions

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{{Seed}}
[[Image:3ep1.jpg|left|200px]]


<!--
==Structure of the PGRP-Hd from Alvinella pompejana==
The line below this paragraph, containing "STRUCTURE_3ep1", creates the "Structure Box" on the page.
<StructureSection load='3ep1' size='340' side='right'caption='[[3ep1]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ep1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Alvinella_pompejana Alvinella pompejana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EP1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EP1 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ep1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ep1 OCA], [https://pdbe.org/3ep1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ep1 RCSB], [https://www.ebi.ac.uk/pdbsum/3ep1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ep1 ProSAT]</span></td></tr>
{{STRUCTURE_3ep1|  PDB=3ep1  |  SCENE=  }}
</table>
 
== Function ==
===Structure of the PGRP-Hd from Alvinella pompejana===
[https://www.uniprot.org/uniprot/D0VX04_9ANNE D0VX04_9ANNE]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3EP1 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Alvinella_pompejana Alvinella pompejana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EP1 OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ep/3ep1_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ep1 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Alvinella pompejana]]
[[Category: Alvinella pompejana]]
[[Category: Delfosse, V.]]
[[Category: Large Structures]]
[[Category: Gagniere, N.]]
[[Category: Delfosse V]]
[[Category: Lecompte, O.]]
[[Category: Gagniere N]]
[[Category: Mayer, C.]]
[[Category: Lecompte O]]
[[Category: Perrodou, E.]]
[[Category: Mayer C]]
[[Category: Poch, O.]]
[[Category: Perrodou E]]
[[Category: Alvinella pompejana]]
[[Category: Poch O]]
[[Category: Immune system]]
[[Category: Model system]]
[[Category: Pgrp-hd]]
[[Category: Thermophile]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:26:20 2009''
Retrieved from "https://proteopedia.org/3ep1"