3jzv: Difference between revisions

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'''Unreleased structure'''


The entry 3jzv is ON HOLD
==Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.==
 
<StructureSection load='3jzv' size='340' side='right'caption='[[3jzv]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3jzv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_rubrum_ATCC_11170 Rhodospirillum rubrum ATCC 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JZV FirstGlance]. <br>
Description: Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct  7 13:44:29 2009''
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jzv OCA], [https://pdbe.org/3jzv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jzv RCSB], [https://www.ebi.ac.uk/pdbsum/3jzv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jzv ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CUPIN_RHORT CUPIN_RHORT] Catalyzes the formation of S-(methylsulfanyl)glutathione and 1-deoxy-D-xylulose 5-phosphate (DXP) from 1-methylthioxylulose 5-phosphate (MTXu-5P) (PubMed:23035785, PubMed:23042035). The S-(methylsulfanyl)glutathione is reductively cleaved to relase methanethiol in a second reaction. Involved in the MTA-isoprenoid shunt of the methionine salvage pathway (PubMed:23042035).<ref>PMID:23035785</ref> <ref>PMID:23042035</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jz/3jzv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jzv ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Rhodospirillum rubrum ATCC 11170]]
[[Category: Almo SC]]
[[Category: Burley SK]]
[[Category: Ramagopal UA]]
[[Category: Toro R]]
Retrieved from "https://proteopedia.org/3jzv"