3k89: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3k89.jpg|left|200px]]


<!--
==Structure of X. oryzae pv. oryzae KACC10331, Xoo0880(fabD) complexed with glycerol==
The line below this paragraph, containing "STRUCTURE_3k89", creates the "Structure Box" on the page.
<StructureSection load='3k89' size='340' side='right'caption='[[3k89]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3k89]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K89 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K89 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
{{STRUCTURE_3k89|  PDB=3k89  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k89 OCA], [https://pdbe.org/3k89 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k89 RCSB], [https://www.ebi.ac.uk/pdbsum/3k89 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k89 ProSAT]</span></td></tr>
 
</table>
===Structure of X. oryzae pv. oryzae KACC10331, Xoo0880(fabD) complexed with glycerol===
== Function ==
 
[https://www.uniprot.org/uniprot/Q5H4I7_XANOR Q5H4I7_XANOR]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3K89 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K89 OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k8/3k89_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k89 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Xanthomonas oryzae pv. oryzae]]
[[Category: Xanthomonas oryzae pv. oryzae]]
[[Category: Jung, J W.]]
[[Category: Jung JW]]
[[Category: Kang, L W.]]
[[Category: Kang LW]]
[[Category: Natarajan, S.]]
[[Category: Natarajan S]]
[[Category: Bacterial blight]]
[[Category: Fabd]]
[[Category: Xanthomonas oryzae pv. oryzae kacc10331]]
[[Category: Xoo0880]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 14:05:03 2009''

Latest revision as of 16:08, 1 November 2023

Structure of X. oryzae pv. oryzae KACC10331, Xoo0880(fabD) complexed with glycerol

3k89, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA