1y9e: Difference between revisions

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New page: left|200px<br /><applet load="1y9e" size="450" color="white" frame="true" align="right" spinBox="true" caption="1y9e, resolution 2.80Å" /> '''Crystal structure of...
 
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[[Image:1y9e.jpg|left|200px]]<br /><applet load="1y9e" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1y9e, resolution 2.80&Aring;" />
'''Crystal structure of Bacillus subtilis protein yhfP with NAD bound'''<br />


==About this Structure==
==Crystal structure of Bacillus subtilis protein yhfP with NAD bound==
1Y9E is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with NAD as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1Y9E OCA].  
<StructureSection load='1y9e' size='340' side='right'caption='[[1y9e]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1y9e]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y9E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y9E FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y9e OCA], [https://pdbe.org/1y9e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y9e RCSB], [https://www.ebi.ac.uk/pdbsum/1y9e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y9e ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1y9e TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YHFP_BACSU YHFP_BACSU]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y9/1y9e_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y9e ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Burley, S.K.]]
[[Category: Burley SK]]
[[Category: Gorman, J.]]
[[Category: Gorman J]]
[[Category: Min, T.]]
[[Category: Min T]]
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
[[Category: Shapiro L]]
[[Category: Shapiro, L.]]
[[Category: NAD]]
[[Category: alcohol dehydrogenase activity]]
[[Category: bacillus subtilis]]
[[Category: hypothetical protein yhfp]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]
[[Category: zinc-dependent]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 03:45:01 2007''
Retrieved from "https://proteopedia.org/1y9e"