3kw2: Difference between revisions
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New page: '''Unreleased structure''' The entry 3kw2 is ON HOLD Authors: Ramagopal, U.A., Toro, R., Burley, S. K, Almo, S. C. Description: Crystal structure of probable rRNA-methyltransferase fro... |
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==Crystal structure of probable rRNA-methyltransferase from Porphyromonas gingivalis== | |||
<StructureSection load='3kw2' size='340' side='right'caption='[[3kw2]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3kw2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_ATCC_33277 Porphyromonas gingivalis ATCC 33277]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KW2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KW2 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADN:ADENOSINE'>ADN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kw2 OCA], [https://pdbe.org/3kw2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kw2 RCSB], [https://www.ebi.ac.uk/pdbsum/3kw2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kw2 ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/B2RH75_PORG3 B2RH75_PORG3] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity).[PIRNR:PIRNR015601] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kw2_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kw2 ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Porphyromonas gingivalis ATCC 33277]] | |||
[[Category: Almo SC]] | |||
[[Category: Burley SK]] | |||
[[Category: Ramagopal UA]] | |||
[[Category: Toro R]] | |||
Latest revision as of 10:06, 6 November 2024
Crystal structure of probable rRNA-methyltransferase from Porphyromonas gingivalis
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