3iwz: Difference between revisions

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{{Seed}}
[[Image:3iwz.jpg|left|200px]]


<!--
==The c-di-GMP Responsive Global Regulator CLP Links Cell-Cell Signaling to Virulence Gene Expression in Xanthomonas campestris==
The line below this paragraph, containing "STRUCTURE_3iwz", creates the "Structure Box" on the page.
<StructureSection load='3iwz' size='340' side='right'caption='[[3iwz]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3iwz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris Xanthomonas campestris pv. campestris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IWZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IWZ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iwz OCA], [https://pdbe.org/3iwz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iwz RCSB], [https://www.ebi.ac.uk/pdbsum/3iwz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iwz ProSAT]</span></td></tr>
{{STRUCTURE_3iwz|  PDB=3iwz  |  SCENE=  }}
</table>
 
== Function ==
===The c-di-GMP Responsive Global Regulator CLP Links Cell-Cell Signaling to Virulence Gene Expression in Xanthomonas campestris===
[https://www.uniprot.org/uniprot/CLP_XANCP CLP_XANCP] Global transcriptional regulator that regulates virulence factors production by activating or repressing the expression of a large set of genes in diffusible signal factor (DSF) pathway. It includes, among others, genes involved in extracellular polysaccharide (EPS) synthesis, flagellum synthesis, protein and fatty acid metabolism, multidrug resistance, iron uptake or genes encoding extracellular enzymes, membrane components and a few transcription factors. Regulation can be direct or indirect, via regulation of other transcriptional regulators. Not involved in DSF-mediated biofilm dispersal.<ref>PMID:17378922</ref>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3IWZ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris Xanthomonas campestris pv. campestris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IWZ OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iw/3iwz_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iwz ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Xanthomonas campestris pv. campestris]]
[[Category: Xanthomonas campestris pv. campestris]]
[[Category: Chin, K H.]]
[[Category: Chin KH]]
[[Category: Chou, S H.]]
[[Category: Chou SH]]
[[Category: Dow, J M.]]
[[Category: Dow JM]]
[[Category: Tseng, Y H.]]
[[Category: Tseng YH]]
[[Category: Tu, Z L.]]
[[Category: Tu ZL]]
[[Category: Wang, A H.J.]]
[[Category: Wang AHJ]]
[[Category: C-di-gmp receptor]]
[[Category: Clp]]
[[Category: Crp]]
[[Category: Dna-binding]]
[[Category: Pathogenicity]]
[[Category: Quorum sensing]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Xcc]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 16 13:53:09 2009''
Retrieved from "https://proteopedia.org/3iwz"