3ksm: Difference between revisions

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{{Seed}}
[[Image:3ksm.jpg|left|200px]]


<!--
==Crystal structure of ABC-type sugar transport system, periplasmic component from Hahella chejuensis==
The line below this paragraph, containing "STRUCTURE_3ksm", creates the "Structure Box" on the page.
<StructureSection load='3ksm' size='340' side='right'caption='[[3ksm]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ksm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Hahella_chejuensis_KCTC_2396 Hahella chejuensis KCTC 2396]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KSM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDR:BETA-D-RIBOFURANOSYL'>BDR</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3ksm|  PDB=3ksm  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ksm OCA], [https://pdbe.org/3ksm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ksm RCSB], [https://www.ebi.ac.uk/pdbsum/3ksm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ksm ProSAT]</span></td></tr>
 
</table>
===Crystal structure of ABC-type sugar transport system, periplasmic component from Hahella chejuensis===
== Function ==
 
[https://www.uniprot.org/uniprot/Q2S7D2_HAHCH Q2S7D2_HAHCH]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3KSM is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Hahella_chejuensis_kctc_2396 Hahella chejuensis kctc 2396]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSM OCA].  
Check<jmol>
[[Category: Hahella chejuensis kctc 2396]]
  <jmolCheckbox>
[[Category: Bagaria, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/3ksm_consurf.spt"</scriptWhenChecked>
[[Category: Burley, S K.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Kumaran, D.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Swaminathan, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ksm ConSurf].
[[Category: 11023l]]
<div style="clear:both"></div>
[[Category: Abc-type sugar transport system]]
__TOC__
[[Category: New york sgx research center for structural genomic]]
</StructureSection>
[[Category: Nysgxrc]]
[[Category: Hahella chejuensis KCTC 2396]]
[[Category: Periplasmic component]]
[[Category: Large Structures]]
[[Category: Protein structure initiative]]
[[Category: Bagaria A]]
[[Category: Psi-ii]]
[[Category: Burley SK]]
[[Category: Structural genomic]]
[[Category: Kumaran D]]
 
[[Category: Swaminathan S]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 16 14:34:28 2009''
Retrieved from "https://proteopedia.org/3ksm"