2krc: Difference between revisions
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New page: '''Unreleased structure''' The entry 2krc is ON HOLD Authors: Motackova, V., Sanderova, H., Zidek, L., Novacek, J., Padrta, P., Svenkova, A., Jonak, J., Krasny, L., Sklenar, V. Descrip... |
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==Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA polymerase== | |||
<StructureSection load='2krc' size='340' side='right'caption='[[2krc]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2krc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KRC FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2krc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2krc OCA], [https://pdbe.org/2krc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2krc RCSB], [https://www.ebi.ac.uk/pdbsum/2krc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2krc ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/RPOE_BACSU RPOE_BACSU] Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling. May function in sigma factor switching. It displaces RNA bound to RNA polymerase in a binary complex. | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kr/2krc_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2krc ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Bacillus subtilis]] | |||
[[Category: Large Structures]] | |||
[[Category: Jonak J]] | |||
[[Category: Krasny L]] | |||
[[Category: Motackova V]] | |||
[[Category: Novacek J]] | |||
[[Category: Padrta P]] | |||
[[Category: Sanderova H]] | |||
[[Category: Sklenar V]] | |||
[[Category: Svenkova A]] | |||
[[Category: Zidek L]] | |||
