3jtf: Difference between revisions

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{{Seed}}
[[Image:3jtf.jpg|left|200px]]


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==The CBS Domain Pair Structure of a magnesium and cobalt efflux protein from Bordetella parapertussis in complex with AMP==
The line below this paragraph, containing "STRUCTURE_3jtf", creates the "Structure Box" on the page.
<StructureSection load='3jtf' size='340' side='right'caption='[[3jtf]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3jtf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_parapertussis Bordetella parapertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JTF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JTF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3jtf|  PDB=3jtf  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jtf OCA], [https://pdbe.org/3jtf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jtf RCSB], [https://www.ebi.ac.uk/pdbsum/3jtf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jtf ProSAT]</span></td></tr>
 
</table>
===The CBS Domain Pair Structure of a magnesium and cobalt efflux protein from Bordetella parapertussis in complex with AMP===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3JTF is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bordetella_parapertussis Bordetella parapertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JTF OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jt/3jtf_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jtf ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bordetella parapertussis]]
[[Category: Bordetella parapertussis]]
[[Category: Cobb, G.]]
[[Category: Large Structures]]
[[Category: Cuff, M E.]]
[[Category: Cobb G]]
[[Category: Joachimiak, A.]]
[[Category: Cuff ME]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Joachimiak A]]
[[Category: Tesar, C.]]
[[Category: Tesar C]]
[[Category: Amp]]
[[Category: Cbs domain]]
[[Category: Corc]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Transport protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 23 10:12:52 2009''

Latest revision as of 01:59, 21 November 2024

The CBS Domain Pair Structure of a magnesium and cobalt efflux protein from Bordetella parapertussis in complex with AMP

3jtf, resolution 2.00Å

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