3a8r: Difference between revisions

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{{Seed}}
[[Image:3a8r.png|left|200px]]


<!--
==The structure of the N-terminal regulatory domain of a plant NADPH oxidase==
The line below this paragraph, containing "STRUCTURE_3a8r", creates the "Structure Box" on the page.
<StructureSection load='3a8r' size='340' side='right'caption='[[3a8r]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3a8r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryza_sativa_Japonica_Group Oryza sativa Japonica Group]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A8R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A8R FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_3a8r|  PDB=3a8r  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a8r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a8r OCA], [https://pdbe.org/3a8r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a8r RCSB], [https://www.ebi.ac.uk/pdbsum/3a8r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a8r ProSAT]</span></td></tr>
 
</table>
===The structure of the N-terminal regulatory domain of a plant NADPH oxidase===
== Function ==
 
[https://www.uniprot.org/uniprot/RBOHB_ORYSJ RBOHB_ORYSJ] Calcium-dependent NADPH oxidase that generates superoxide.
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19864426}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 19864426 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a8/3a8r_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19864426}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3A8R is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Oryza_sativa_japonica_group Oryza sativa japonica group]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A8R OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a8r ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:19864426</ref><references group="xtra"/>
</StructureSection>
[[Category: Oryza sativa japonica group]]
[[Category: Large Structures]]
[[Category: Akashi, S.]]
[[Category: Oryza sativa Japonica Group]]
[[Category: Hashimoto, H.]]
[[Category: Akashi S]]
[[Category: Hayashi, K.]]
[[Category: Hashimoto H]]
[[Category: Kawasaki, T.]]
[[Category: Hayashi K]]
[[Category: Kojima, C.]]
[[Category: Kawasaki T]]
[[Category: Kuwabara, N.]]
[[Category: Kojima C]]
[[Category: Oda, T.]]
[[Category: Kuwabara N]]
[[Category: Sato, M.]]
[[Category: Oda T]]
[[Category: Shimamoto, K.]]
[[Category: Sato M]]
[[Category: Shimizu, T.]]
[[Category: Shimamoto K]]
[[Category: Wong, H L.]]
[[Category: Shimizu T]]
[[Category: Calcium]]
[[Category: Wong HL]]
[[Category: Calcium binding protein]]
[[Category: Ef-hand]]
[[Category: Membrane]]
[[Category: Oxidoreductase]]
[[Category: Transmembrane]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 13 12:56:16 2010''

Latest revision as of 13:59, 13 March 2024

The structure of the N-terminal regulatory domain of a plant NADPH oxidase

3a8r, resolution 2.40Å

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