User:Wayne Decatur/SandboxYeastRibosome: Difference between revisions
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==Yeast Ribosome based on Cryo-EM and Protein Homology Modeling== | ==Yeast Ribosome based on Cryo-EM and RNA and Protein Homology Modeling== | ||
{{Template:80ScryoRIBO}} | |||
Atomic model of a eukaryotic [[ribosome]] obtained by combined cryo-EM and RNA and protein homology modeling. Specifically, cryo-EM reconstruction of the 80S ribosome from the thermophilic fungus ''Thermomyces lanuginosus'' was used as a guide guide for building homology models of the ''S. cerevisiae'' ribosomal proteins and rRNA sequences that fit the cryo-EM map. | |||
{{Link Toggle FancyCartoonHighQualityView}}. <!--load pdb from uploaded file 3jyxwvALPHAC.pdb.gz --> | |||
==About this Structure== | ==About this Structure== | ||
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[[3jyw]] is a 30 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermomyces_lanuginosus Thermomyces lanuginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYW OCA].<br> | [[3jyw]] is a 30 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermomyces_lanuginosus Thermomyces lanuginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYW OCA].<br> | ||
[[3jyv]] is a 19 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermomyces_lanuginosus Thermomyces lanuginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYV OCA].<br> | [[3jyv]] is a 19 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermomyces_lanuginosus Thermomyces lanuginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYV OCA].<br> | ||
<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/1'>Testing undo</scene> | |||
<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/2'>Test 76</scene> | |||
<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/3'>Test 110</scene> | |||
<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/4'>Test 116</scene> | |||
<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/5'>Test dots</scene> | |||
==Reference== | ==Reference== | ||
<ref group="xtra">PMID: 20004163 </ref><references group="xtra"/> | <ref group="xtra">PMID: 20004163 </ref><references group="xtra"/> | ||
[[Category: Thermomyces lanuginosus]] | [[Category: Thermomyces lanuginosus]] | ||
[[Category: Saccharomyces cerevisiae]] | |||
[[Category: Devkota, B.]] | [[Category: Devkota, B.]] | ||
[[Category: Frank, J.]] | [[Category: Frank, J.]] | ||
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[[Category: Taylor, D J.]] | [[Category: Taylor, D J.]] | ||
[[Category: Topf, M.]] | [[Category: Topf, M.]] | ||
[[Category: | [[Category: 80S]] | ||
[[Category: Eukaryotic ribosome]] | [[Category: Eukaryotic ribosome]] | ||
[[Category: Flexible fitting]] | [[Category: Flexible fitting]] | ||
[[Category: Rack1 protein]] | [[Category: Rack1 protein]] | ||
